NAGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCC
GCGGAATTCTGGAATTTCTAAATGTAGACTACAGTAGAAAAAATTAACAT
ACGCCAGAAAATGTCCTTAGACATCAGCAGTGGAAAGAATCCCAACTAAA
ACCTCCAGACACGATTTGATCATAAACCTCTCAAGCAGAAAATTGGCAAT
CACTGTAGAAACAATTCCTCAGGAAGGTATTCAACTTTCAAATAACCCTG
AAACAAAGCAACCCACTGACATTTGCTTCCTGAAGAGGAAACCTTAGATG
TCTGTGTCTATCAGAGTCGTCTTGAAAAAGGGAGTCTTGTATAAAACATG
GAAAACTGCCTTACTAGATAATGAGGCCATTTTGTGATGCATGAGGGGTA
GAAATATGGCTTCTTTCTCTTCTGGCTAGTAAAGAGACAACAACTGGTCC
CACAGCCTGTGGGGAATGGCAGAAATTTGAATGGTACAGGTTATGTCAAG
ATCATAAAAACAGATACCAGGCCTCATTAACTGCTCAGTGAGTGGAAATA
CACCTTTAACCTTTTTGGATAATTCAATAAAATCAGTGCAAGTATTGAAT
TATTCAGAACATAGTGCAGAAATAGTAATTAATGATTTGTGTTTCTTCCA
ATTTTCCTTAATATTTAAAACTTTTAATGGATGCTATATGTTCTTGACAC
CTCTATATTTCAACATAACATGCTACATAGTGCTGTACTTTTAATT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATAAACCTGATAAAAATCTTCAGTGTA
GTAGCTGGATATAAAATTAACTCAAACAAATCAGTGTTTATCAACACAAA
GGATAAATGGACTGAGAAAGAAATTAGGGAAACAACACCCTACACAATAC
CCACAAATATTATAAAATACTTTGGTGTGACTCTAACTAATGAAGTGAAA
GATCTGTATGATAAGTACTTCAAGTCTCCGAAGAAAAAAATTGAAGATCT
CAGAAGATGAAAAGATCTCCCATGCTGATGGATTGACAGGATTAATATAG
TAAAGATGGCTATCTTTCTGAAAACAATCTACATATTCAATGCAATCCCC
ATCAAAATTTCAACTCAATTCTTCACAGAGTTAGAAAGGTCAATTTGCAA
ATTCATGTGTAATAACAAAAAAAATGGATAGTAAAAACTATTCTCAACAA
TTAAAGAACCTCTGATGAAATCACTATGCCTCAACTCAAGCTGTACCACA
GAACAATTATCATAAAAACTGTATGGTACTGGTACAGCCACAGACAGGTA
GATTAATGTAATAGACCCATAAATGAACCCATACACCTATGGTCACTTTA
TCTTTGACAAAGGAGCTAAAACCATCCAATGGAAAAAAGATAGCATTTTC
AACCAATGGTGCTGGCTTAACTGTANGTTATTATGTAGAAGAATGTGAAT
TGATCCATTCTN

Query= MSMg01no484_o19.b1 MSMg01no484_o19.b1 CHROMAT_FILE:
MSMg01no484_o19.b1 PHD_FILE: MSMg01no484_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:40 2005
         (667 letters)



>mm_chr10_54951996_54953062
          Length = 1067

 Score = 1259 bits (651), Expect = 0.0
 Identities = 663/667 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tacagtagaaaaaattaacatacgccagaaaatgtccttagacatcagcagtggaaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacagtagaaaaaattaacatacgccagaaaatgtccttagacatcagcagtggaaagaa 260

                                                                       
Query: 61  tcccaactaaaacctccagacacgatttgatcataaacctctcaagcagaaaattggcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccaactaaaacctccagacacgatttgatcataaacctctcaagcagaaaattggcaa 320

                                                                       
Query: 121 tcactgtagaaacaattcctcaggaaggtattcaactttcaaataaccctgaaacaaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcactgtagaaacaattcctcaggaaggtattcaactttcaaataaccctgaaacaaagc 380

                                                                       
Query: 181 aacccactgacatttgcttcctgaagaggaaaccttagatgtctgtgtctatcagagtcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacccactgacatttgcttcctgaagaggaaaccttagatgtctgtgtctatcagagtcg 440

                                                                       
Query: 241 tcttgaaaaagggagtcttgtataaaacatggaaaactgccttactagataatgaggcca 300
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcaggaaaaagggagtcttgtataaaacatggaaaactgccttactagataatgaggcca 500

                                                                       
Query: 301 ttttgtgatgcatgaggggtagaaatatggcttctttctcttctggctagtaaagagaca 360
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 ttttgtgatgcatgaggggtagaaatatggcttctttctcttctgggtagtaaagagaca 560

                                                                       
Query: 361 acaactggtcccacagcctgtggggaatggcagaaatttgaatggtacaggttatgtcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaactggtcccacagcctgtggggaatggcagaaatttgaatggtacaggttatgtcaa 620

                                                                       
Query: 421 gatcataaaaacagataccaggcctcattaactgctcagtgagtggaaatacacctttaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gatcataaaaacagataccaggcctcattaactgctcagtgagtggaaatacacctttaa 680

                                                                       
Query: 481 cctttttggataattcaataaaatcagtgcaagtattgaattattcagaacatagtgcag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctttttggataattcaataaaatcagtgcaagtattgaattattcagaacatagtgcag 740

                                                                       
Query: 541 aaatagtaattaatgatttgtgtttcttccaattttccttaatatttaaaacttttaatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaatagtaattaatgatttgtgtttcttccaattttccttaatatttaaaacttttaatg 800

                                                                       
Query: 601 gatgctatatgttcttgacacctctatatttcaacataacatgctacatagtgctgtact 660
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gatgctatatgttcttaacacctctatatttcaacataacatgctacatagtgctgtact 860

                  
Query: 661 tttaatt 667
           |||||||
Sbjct: 861 tttaatt 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)