Query= MSMg01no485_e02.b1 MSMg01no485_e02.b1 CHROMAT_FILE:
MSMg01no485_e02.b1 PHD_FILE: MSMg01no485_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:08 2005
(125 letters)
>mm_chr10_46147831_46148352
Length = 522
Score = 207 bits (107), Expect = 2e-58
Identities = 118/123 (95%), Gaps = 5/123 (4%)
Strand = Plus / Minus
Query: 1 cagtgcaagcataaaggctcccatcttgaagaccatttggtgaaaccactgaaaataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 cagtgcaagcataaaggctcccatcttgaagaccatttggtgaaaccactgaaaataaat 253
Query: 61 atgtacataccttctcagccatccaagttgaaaacttctctggggcatacaagaaaacta 120
|||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 252 atgtacataccttctcagccatccaagttg--aacttctct-gggcatacaag--aacta 198
Query: 121 ttc 123
|||
Sbjct: 197 ttc 195
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 522
Length adjustment: 8
Effective length of query: 117
Effective length of database: 514
Effective search space: 60138
Effective search space used: 60138
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no485_e02.g1 MSMg01no485_e02.g1 CHROMAT_FILE:
MSMg01no485_e02.g1 PHD_FILE: MSMg01no485_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:08 2005
(652 letters)
>mm_chr10_45972665_45973713
Length = 1049
Score = 1083 bits (560), Expect = 0.0
Identities = 627/656 (95%), Gaps = 13/656 (1%)
Strand = Plus / Plus
Query: 1 tccatgtggccagattcagatgcaaaaaacactggcaagaataaagcccacccaaggttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 tccatgtggccagattcagatgcaaaaaacactggcaagaataaagcccacccatggttg 260
Query: 61 taatatcacataccttggaaagaagagatcaaggctcaacatatatcactcttcttatct 120
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 261 taatatcacataccttggaaagaagagatcaaggctcagcatatatcacttttcttatct 320
Query: 121 aatcagtttgaatctcagaggaataactcagcccttcttgacctcactccatgtacaata 180
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 321 aatcagtttgaatctcagaggaataactcagcccttcttgatctcactccatgtgcaata 380
Query: 181 taaaatggaaagcttgtctaaaggcaaggcatctgcatcctccatctgaggaaagaagta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 taaaatggaaagcttgtctaaaggcaaggcatctgcatcctccatctgaggaaacaagta 440
Query: 241 gccttagtagtctcccgggctccacctcccttttacttcccttgctcttccattgatacc 300
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gccttagtagtctcccaggctccacc-cccttttacttcccttgctcttccattgatacc 499
Query: 301 atggtatcttgctgtacattgttccttgtgtcccatcactgtcatctcagcatttatcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 atggtatcttgctgtacattgttccttgtgtcccatcactgtcatctcagcctttatcct 559
Query: 361 atatactttctcctcatcctcctctttatttttgttttattttcctgttttgttaatgat 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atatactttctcctcctcctcctctttatttttgttttattttcctgttttgttaatgat 619
Query: 421 tttaatgtttcttgtctatacctatcctagatccttt-----ccccccccctctgggaga 475
||||| |||||||||||||||||| |||||||||||| || |||||||||
Sbjct: 620 tttaaagtttcttgtctatacctagcctagatccttttttttcc-------tctgggaga 672
Query: 476 ctatatcggaatgcaattgatgtcttatcttttaaaaccacatctaaatatctagtttgt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctatatcggaatgcaattgatgtcttatcttttaaaaccacatctaaatatctagtttgt 732
Query: 536 gcttgcagacaggttcaaacttttcagtttttattcatgtgcttgcttttattttatgca 595
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 733 gtttgcagacaggttcaaacttttcagtttttattcgtgtgcttgcttttattttatgca 792
Query: 596 tatggctggtttgcctgcatgtatgtccgctatcgtgtgcatgtagtggttgcaga 651
|||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 793 tatggctgttttgcctgcatgtatgtctgctatcgtgtgcatgtagtagttgcaga 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1049
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1039
Effective search space: 667038
Effective search space used: 667038
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
