TGGGGNTNNNNNNNCCCNCCCNNNNNNNGGGTCTCTCNNNNNCCCTATXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAATCCGCGGAATTCCT
ATGCATTTCAATGCTTTTAATTATTCTGACAGCATTTTAATTACCACCTC
CAGTTTGTTTTTAAGCATTGCTACCACAAGTGGAAGAAAATTGTTGCACA
TTACAAAACTATTCACACTACATATTTTGAATGGCNNCTATAGAAACCTA
AAAATAATATTGAGAAATAGTTTGGAATGATCAAGGGAAAGGTTAACTTC
AAATTTCCAACCATAAAAAAGGGTTAACAAGGGAAAACAATTTTCCCCCG
AAAATTTTAAACCCCAAATATTTTTTTACCGGAAAATCCCCCCCTAAAAG
AAGGGGGGGTAAAAACCCCCGGGAACCCCCCAAAATAAAAAAAAAGGGCC
CCCCCCCGGGGTTAAAAAAAAACTCGAAAGAGGGGGCCCCCCTTTTTTGG
TGCCCAAAAAAAATTTTTTTATTGGCGCCCCACAAAAAAACCCCTTTGGG
TATTATTTCCCCCCCGGGGGGGAAAGGGGGGGCCCCCCCACAAAAATTTT
TTTTTTTTTTGAAAAAAAGGTGGGGAAAAAAAAAAATCCTCCCCCCCCCC

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTATCTAGTGCTGAAGTATATGGG
TCACAGCTACCTTCTCTCCTCAGAGTGATCAGCCCTGCATTGATCTTAGG
AGTTCTGATAGGACTCTGAGTTCTTGGTTGATGTTGATGAACTTTGTGGC
TATAATCTCTTCTCTTTTAGAGCAGATTCTGCATATTTTTACTCTGAGTT
TTGTTTGTCTTTGGAGGCTATCTAGAGCCATGTAGGGAACAAAGTAAGGG
GGTGGGGGGTCCTGGGGTCCCTGGGGAAAAGTGGGAAGGAAAAAATATGC
CACATCTGTCCAGAGTTCCTGTATTCTGGGCAGGCAGATGCAGAGAGATT
GCCAGGCGCTTTTCCACTAGGCCCCAGGTGAGCATGCCTGACCCACACCG
TGGGGGCAGAGAAGGGGGCAGCCCCTGACCAGGGACACCCCCCCTACCTT
GCTAAAGCCCCAGGGTTGTGGGAGAGAGGGAATAGGGGAAGAAGTTCCCA
ACACTGACCAGAGTGCGCAGCTGGTCTTGAAGGAGCAGACACTCCCTATG
GTTTAAAAGCTTTATTATAGAAATGCAGGGGAAAGAGGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAGAT
AGATTGTGTTTTCCCCTTTCTCCTTTTCTCTCTCTTTTTTTGCACTTTTC
CG

Query= MSMg01no486_d14.g1 MSMg01no486_d14.g1 CHROMAT_FILE:
MSMg01no486_d14.g1 PHD_FILE: MSMg01no486_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:28 2005
         (613 letters)



>mm_chr10_113234275_113235287
          Length = 1013

 Score =  783 bits (405), Expect = 0.0
 Identities = 429/437 (98%), Gaps = 2/437 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatctagtgctgaagtatatgggtcacagctaccttctctcctcagagtgatcagccctg 60
           |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 436 tatctagtgcagaagtatatgggtcacagctaccttctctcctcagagtggtcagccctg 377

                                                                       
Query: 61  cattgatcttaggagttctgataggactctgagttcttggttgatgttgatgaactttgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cattgatcttaggagttctgataggactctgagttcttggttgatgttgatgaactttgt 317

                                                                       
Query: 121 ggctataatctcttctcttttagagcagattctgcatatttttactctgagttttgtttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ggctataatctcttctcttttagagcagattctgcatatttttactctgagttttgtttg 257

                                                                       
Query: 181 tctttggaggctatctagagccatgtagggaacaaagtaagggggtggggggtcctgggg 240
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 256 tctttggaggctatctagagccatgtagggaacgaagtaagggggtggggggtcctgggg 197

                                                                       
Query: 241 tccctggggaaaagtgggaaggaaaaaatatgccacatct-gtccagagttcctgtattc 299
           |||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 196 tccctgaggaaaagtgggaaggaaaaaatatgccacatctggt-cagagttcctgtattc 138

                                                                       
Query: 300 tgggcaggcagatgcagagagattgccaggcgcttttccactaggccccaggtgagcatg 359
           |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 137 tgggcaggcagatgcagagagactgccaggcgcttttccactacgccccaggtgagcatg 78

                                                                       
Query: 360 cctgacccacaccgtgggggcagagaagggggcagcccctgaccagggacacccccccta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  cctgacccacaccgtgggggcagagaagggggcagcccctgaccagggacacccccccta 18

                            
Query: 420 ccttgctaaagccccag 436
           |||||||||||||||||
Sbjct: 17  ccttgctaaagccccag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)