NNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTTTCAGTTCCCGTTATTGACTCTACTTTCCTTGTGTGCCT
TTTGGATCCTAAAAAAGTAAATAAGTTTAGTGTCATACCAGAATATTGGA
GAGCTGTAGTAATAATAGATGGCACAGTTTATCAACAGAAATTAAAAAGT
AATTCTACTTATCGTAAAATAAATGAGCCAATTCCAGAGGAACTGATAAG
TCAAGGATTTAATGATGGATGTGCCATTAGCAGAAGTCTAATGTGGTCAC
GTGTGGCATTCTCCAGCTTCCTTGGTACCTTCCTGAACCAAGGTTCTGCA
GGGACCCAGGAAACCCATAGGCATGGTGAAGGTCTGAGCACACAACATTC
AGACTCATCACCCAGTTTTGTTTTTGTTTTCCCTGCATATGTTAGCTTAT
GTTAGCATGTTAAATCCAGAAATCGGGTGACTGTGCTTTTGCTTAGGAGA
AATCTGTAGCCTCAGTATGCAGTGTCTGAGGCAGGGGGTTGAAGCTAGCA
TCTGTGAACCACAGTCATATTGGCTTTTCAAGGGAAAAGTAGAGGATTAT
TTTATCATTTCAGTTTGATCCTCCTGTGATTGTGTGTGTGTGTGGTGGGG
GGCCAGAGGGGGAGGGGGAAGATTTTTGNNTTTTTNNTTTTTTTTTTTTN
TNNTTTTTTTTNGTTTNTTTTTTTTTTTTTTTTTTTTTT

NTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTCTATCTATACCCCATTT
TGTAATTGAGGTATTTTTTTCTTGATATCAATTTTAGTCAGATTTTTAAA
AATATATTCTAGATATTAGCCCTCAATCAGAATTTAATTGGTAAATATCT
CTTCCCTTTCTGTAGACTGCTGCTTTTTCCAAATGATGAGGTCTTTTGCC
ATGCAAAAGATTTTCAATTTCATGAAATCCCACTTATTAATTGTTGGGTT
TAGTGCCTGTGCTAATGATATTCTGTGTAGAAAGCCTTTTACTGTGCCGG
TGAGGTCAAGGCTATTTCCCACTTCCTATACTATCAGGTTCAACATATTT
GGTTTTATGTGGAGGTCTTTGATTCATATGGTGTTGGCCTGTCTATTATT
GAATGTGAGATACTGCAGTCACCCAGTATCAATGTATGAGTGTCAATTTG
TGATTTAAGGGCATCTTTTATAAATTTGTGTTCCCTTGTATTTGGTACAT
AGATGCTAAGGATTGAAGTATCCTCTTGGTGGGATTTTTCCTTTGATAAA
TGTGATTTTTTGAGTATATTTGGCCTATAGGGATTCATGGGTTTGGATGG
TTGACCATAGGGAGTGGTGCTATTAGGATGTATAACCTTGCTGAAGGAAG
TGTGTCTCTTTGTAGGAGGCTTTGAGGCCTCCTACGCTCAGGCTCTGCCC
AGTGCAA

Query= MSMg01no486_p03.b1 MSMg01no486_p03.b1 CHROMAT_FILE:
MSMg01no486_p03.b1 PHD_FILE: MSMg01no486_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:24 2005
         (606 letters)



>mm_chr10_108198387_108199391
          Length = 1005

 Score = 1064 bits (550), Expect = 0.0
 Identities = 587/602 (97%), Gaps = 7/602 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctttc---agttcccgttattgactctactttccttgtgtgccttttggatcct 61
           |||||||||||   ||||   ||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcctttcagtagtt---gttattgactctactttccttgtatgccttttggatcct 261

                                                                       
Query: 62  aaaaaagtaaataagtttagtgtcataccagaatattggagagctgtagtaataatagat 121
           ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct: 262 aaaaaagtaaataagtttagtgttataccagaatattggagagctgcagtaataatagat 321

                                                                       
Query: 122 ggcacagtttatcaacagaaattaaaaagtaattctacttatcgtaaaataaatgagcca 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggcacagtttatcaacagaaattaaaaagtaattctacttatcgtaaaataaatgagcca 381

                                                                       
Query: 182 attccagaggaactgataagtcaaggatttaatgatggatgtgccattagcagaagtcta 241
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 382 attccagaggaactgataagtcagggatttaatgatggatgtgccataagcagaagtcta 441

                                                                       
Query: 242 atgtggtcacgtgtggcattctccagcttccttggtaccttcctgaaccaaggttctgca 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atgtggtcacgtgtggcattctccagcttccttggtaccttcctgaaccaaggttctgca 501

                                                                       
Query: 302 gggacccaggaaacccataggcatggtgaaggtctgagcacacaacattcagactcatca 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 502 gggacccaggaaacccataggcatggtgaaggtctgagcacacaacattcagactcatcg 561

                                                                       
Query: 362 cccagttttgtttttgttttccctgcatatgttagcttatgttagcatgttaaatccaga 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cccagttttgtttttgttttccctgcatatgttagcttatgttagcatgttaaatccaga 621

                                                                       
Query: 422 aatcgggtgactgtgcttttgcttaggagaaatctgtagcctcagtatgcagtgtctgag 481
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 622 aatcgggtgactgtgcttttgcttaggagaaatctgtagcctcagtatgcagagtctgag 681

                                                                       
Query: 482 gcagggggttgaagctagcatctgtgaaccacagtcatattggcttttcaagggaaaagt 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gcagggggttgaagctagcatctgtgaaccacagtcatattggcttttcaagggaaaagt 741

                                                                       
Query: 542 agaggattattttatcatttcagtttgatcctcctgtgattgtgtgtgtgtgtggtgggg 601
           ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agagggttattt-atcatttcagtttgatcctcctgtgattgtgtgtgtgtgtggtgggg 800

             
Query: 602 gg 603
           ||
Sbjct: 801 gg 802


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1005
Length adjustment: 10
Effective length of query: 596
Effective length of database: 995
Effective search space:   593020
Effective search space used:   593020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)