Query= MSMg01no487_n16.b1 MSMg01no487_n16.b1 CHROMAT_FILE:
MSMg01no487_n16.b1 PHD_FILE: MSMg01no487_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:35 2005
(714 letters)
>mm_chr10_96424710_96425823
Length = 1114
Score = 1324 bits (685), Expect = 0.0
Identities = 703/709 (99%)
Strand = Plus / Minus
Query: 5 gaattcatgttgatcctctacccctatggtgggccagtggaagtgtccattggtctttgc 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 gaattcatgttgatcttctacccctatggtgggccagtggaagtgtccattggtctttgc 854
Query: 65 ggaaaaggatccgcatatctactgaccaagccttccctatctctccctgccttcacttgg 124
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 853 ggaaaaggatccgcatatctactgaccaagccttccctatctctccatgccttcacttgg 794
Query: 125 ggttctctatcaggatctattttgatcctcacaaggaaacttgtttaagtcaatctgact 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 793 ggttctctatcaggatctattttgatcctcacaaggaaacttgtttaagtcaatctgatt 734
Query: 185 tgctcatattagaggccaacagtatgacctcccatgtcctgttttgtctagagcaatgag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tgctcatattagaggccaacagtatgacctcccatgtcctgttttgtctagagcaatgag 674
Query: 245 agtgattagaaaaccatgctgatgtacggagagagagctgagcctactacaatgagtcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 673 agtgattagaaaaccatgctgatgtacggagagagagctgagcctactacagtgagtcag 614
Query: 305 aagcatttgcctttgaaatgaggtaagctgagctaggattttgcatgagacaaattagag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aagcatttgcctttgaaatgaggtaagctgagctaggattttgcatgagacaaattagag 554
Query: 365 atactatctctcaagacctgtaatttccttttagagaacatctgttgtctgaaggcaagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 atactatctctcaagacctgtaatttccttttagagaacatctgttgtctgaaggcaagc 494
Query: 425 aggcaggtcacactgctaccagaagctgagaccattcacaataataccaacctcagcaat 484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aggcaggtcacattgctaccagaagctgagaccattcacaataataccaacctcagcaat 434
Query: 485 taatgtataaagcagccatacttaacatgcacaccatgtaattctggaggatattgatgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 taatgtataaagcagccatacttaacatgcacaccatgtaattctggaggatattgatgt 374
Query: 545 aattcattgaaagagtagcacatcaactaccatcaatactgtcaaacagttctatgattc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 aattcattgaaagagtagcacatcaactaccatcaatactgtcaaacagttctatgattc 314
Query: 605 tcccacaaagagggaagcacaatttcaccagtacccatcaacacttaaatcactcttaac 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 tcccacaaagagggaagcacaatttcaccagtacccatcaacacttaaatcactcttaac 254
Query: 665 ttttaagacaaacattccatttcgagggatcttacctgaattcaacaca 713
||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttttaagacgaacattccatttcgagggatcttacctgaattcaacaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 714
Length of database: 1114
Length adjustment: 10
Effective length of query: 704
Effective length of database: 1104
Effective search space: 777216
Effective search space used: 777216
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no487_n16.g1 MSMg01no487_n16.g1 CHROMAT_FILE:
MSMg01no487_n16.g1 PHD_FILE: MSMg01no487_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:35 2005
(602 letters)
>mm_chr10_96264820_96265821
Length = 1002
Score = 1058 bits (547), Expect = 0.0
Identities = 590/605 (97%), Gaps = 3/605 (0%)
Strand = Plus / Plus
Query: 1 agagtcaaagaagatagttaatataggatctttattgccaaataaagaatttgagtttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agagtcaaagaagatagttaatataggatctttattgccaaataaagaatttgagtttta 259
Query: 61 ctgtgtgagaaacaggaaataaaggcttttgagcagcagagcatcgtgacctgatttgta 120
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 260 ctgtgtgagaaacaggaaataaagacttttgagcagcagagcatcatgacctgatttgta 319
Query: 121 tatgaaggcaatggctctgca-ttagtggatataagtgaagacagagatgtagggagggt 179
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 320 tatgaaggcaatggctctgcatttagtggatataagcgaagacagagatgtagggagggt 379
Query: 180 agcccagagaatcctctgagttcagtagagagattaagtaaattaatttagaaaaggggt 239
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 380 agcccagagaatcctctgagttcagtagagagactaagtgaattaatttagaaaaggggt 439
Query: 240 agtaatgacaggaaaactcagatttctttgtagaagaagcattgttatgaaacaatgaca 299
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 440 agtaatgacaggaaaactcagatttctttgtggaagaagcattgttatgaaataatgaca 499
Query: 300 tggacattgcaaataagacccctcccccagtggtcaaggctgtatgtataagatctgtac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggacattgcaaataagacccctcccccagtggtcaaggctgtatgtataagatctgtac 559
Query: 360 aagatcaaatcagccatatcctgggatgaatatgaagtcctttgcgtagctcaggatcta 419
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 560 aagatcaaatcagccatattctgggatgaatatgaagtcctttgcatagctcaggatcta 619
Query: 420 ttgccagttgatagtttaggggtgagtagttaggttgtttttcaggtatatggcccatgg 479
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 620 ttgccagttgatagtttaggggtgagtagttaggttgtttttcagggatatggcccatgg 679
Query: 480 taagttgcctatgttcctgatggacagtccaatactcatgcacatctgacaacattaatt 539
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taagttgcctatgtccctgatggacagtccaatactcatgcacatctgacaacattaatt 739
Query: 540 caattaatgttgggttaaaaaataagcacatacagttgagagagagag--tcttggtggg 597
||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 740 caactaatgttgggttaaaaaataagcacatacagttgagagagagagagtcttggtggg 799
Query: 598 ggaga 602
|||||
Sbjct: 800 ggaga 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
