Query= MSMg01no488_b03.b1 MSMg01no488_b03.b1 CHROMAT_FILE:
MSMg01no488_b03.b1 PHD_FILE: MSMg01no488_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:52 2005
(690 letters)
>mm_chr10_7013107_7014196
Length = 1090
Score = 1266 bits (655), Expect = 0.0
Identities = 679/689 (98%), Gaps = 5/689 (0%)
Strand = Plus / Minus
Query: 5 gaattctttgctttggttttcagggattgtggatgggtgaagggttgggagatcctggtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaattctttgctttggttttcagggattgtggatgggtgaagggttgggagatcctggtc 745
Query: 65 actgaggctgaaggagtagaaagttctggggatctaccaagtgacatggtgactgtagtt 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 744 actgaggctgaaggagtagaaagttctggggatctaccaagtggcatggtgactgtagtt 685
Query: 125 aacaccagttctgtttacttgaagcttgtcagagagaagagcttaaatattctcatggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aacaccagttctgtttacttgaagcttgtcagagagaagagcttaaatattctcatggca 625
Query: 185 cataaaaaatattaaggaggcaagattatgaatgtctgttggtttgatatgatcatgtca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cataaaaaatattaaggaggcaagattatgaatgtctgttggtttgatatgatcatgtca 565
Query: 245 cagtaatcaagctttgataaagctgcaaacaaacacaaatgtttccacatccagaggata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagtaatcaagctttgataaagctgcaaacaaacacaaatgtttccacatccagaggata 505
Query: 305 tcctgtccctttactacacagaggcaacctctattcttttttttatcgtccccaaatttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcctgtccctttactacacagaggcaacctctattcttttttttatcgtccccaaatttt 445
Query: 365 actttatgtgtatggatattttgcctgcatgtatcgatgtgtcaaatgcatgcagtgccc 424
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 actttatgtgtatggatattttgcctgcatgtatagatgtgtcaaatgcatgcagtgccc 385
Query: 425 acagaggccagaagagggcactctggaactggagtatggagccaccacatagattctggc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagaggccagaagagggcactctggaactggagtatggagccaccacatagattctggc 325
Query: 485 aattgaacccagattgtcttgcctgctaagtgatctctccagccctgcaaccaccgttca 544
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 324 aattgaacccagattgtcttgcctgctaagtgatctctccagccctgcatccaccgttca 265
Query: 545 taaccctctcaccactgattttgttttgtctgctctttgacttc---tacaatttgactc 601
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 264 taaccctctcaccactgattttgttttgtctgctctttgacttcttgt--aatttgactc 207
Query: 602 aagaagcgtacctttgcctgggtacagcttcttttgttctcagcccaactgtgagtcttt 661
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 206 aagaagcatacctttgcctgggtacagcttcttttgttctcagcccgactgtgagtcttt 147
Query: 662 ctggtttgtgtatcttaagtcccatcttt 690
|||||||||||||||||||||||||||||
Sbjct: 146 ctggtttgtgtatcttaagtcccatcttt 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space: 734400
Effective search space used: 734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_b03.g1 MSMg01no488_b03.g1 CHROMAT_FILE:
MSMg01no488_b03.g1 PHD_FILE: MSMg01no488_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:52 2005
(635 letters)
>mm_chr10_6969797_6970828
Length = 1032
Score = 1178 bits (609), Expect = 0.0
Identities = 628/635 (98%), Gaps = 3/635 (0%)
Strand = Plus / Plus
Query: 1 agggtaaaaagacagaattagatgctgtcaacagatggacatcaactgatggcaccagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggtaaaaagacagaattagatgctgtcaacagatggacatcaactgatggcaccagta 260
Query: 61 gggagagtcacatcacacaggaagactgtacaaatgaagatgctgggaaggaggggaacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggagagtcacatcacacaggaagactgtacaaatgaagatgctgggaaggaggggaacg 320
Query: 121 ggtgctggagacagggcataggaagcaccattgcagaggcagacctggagaaaagactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgctggagacagggcataggaagcaccattgcagaggcagacctggagaaaagactca 380
Query: 181 agaaggattagcaaacagaaaatcatgaggacagaaaatgtaagagagggacagtcctgg 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaggattagcaaacagaagatcatgaggacagaaaatgtaagagagggacagtcctgg 440
Query: 241 cttaaagatactcagggacaagagagaacttcagaggaactgatgagctaccaaatcaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttaaagatactcagggacaagagagaacttcagaggaactgatgagctaccaaatcaaa 500
Query: 301 gtcaggtctgtgaaaatctgttagactgaggcacaagatggccctttggacagctgtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcaggtctgtgaaaatctgttagactgaggcacaagatggccctttggacagctgtgct 560
Query: 361 ggaagctgacatcagattaccatggctgaaagatatatgtgtcatgggtgaagaaatacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggaagctgacatcagattaccatggctgaaagatatatgtgtcatgggtgaagaaatacc 620
Query: 421 tggaaaaaaggagagagggaaagagaaatgtaggatggtacctagggtgcatgacagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggaaaaaaggagagagggaaagagaaatgtaggatggtacctagggtgcatgacagaaa 680
Query: 481 agaagaagcctatgtctggtagagaatggtaactgctactttaagcaaaggaaaaagaca 540
||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||
Sbjct: 681 agaagaagcctatgtctggtagagaatggtaactg-tactttaaacaaaggaaagagaca 739
Query: 541 acttgtgggacttgttagattggaagtgctgatagagaaagaggttgacaatacagacac 600
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 740 acttgtgggacttgttagattggaagtgctgatagagaaag--gttgacaatacagacac 797
Query: 601 gaagcataatcagtggagagatgtgcctggactcc 635
| |||||||||||||||||||||||||||||||||
Sbjct: 798 ggagcataatcagtggagagatgtgcctggactcc 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1032
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1022
Effective search space: 638750
Effective search space used: 638750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
