Query= MSMg01no489_j06.b1 MSMg01no489_j06.b1 CHROMAT_FILE:
MSMg01no489_j06.b1 PHD_FILE: MSMg01no489_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:51 2005
(666 letters)
>mm_chr10_29915948_29917013
Length = 1066
Score = 1181 bits (611), Expect = 0.0
Identities = 650/663 (98%), Gaps = 2/663 (0%)
Strand = Plus / Minus
Query: 5 gaattcac-aattactatttttttgttacactagtagtaatagtaaaatttctcaattag 63
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gaattcacaaaacactatttttttgttacactagtagtaatagtaaaatttctcaattag 681
Query: 64 aagattgtaagcatcagctaaagtttttacaaacttgtttccatctataaaccacaaaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aagattgtaagcatcagctaaagtttttacaaacttgtttccatctataaaccacaaaca 621
Query: 124 agaagatgtaaatcaaactgacatactttcttcagtcatgagatttagtagataaggcat 183
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agaagatgtaaatcaaactgatatactttcttcagtcatgagatttagtagataaggcat 561
Query: 184 tttcccatgtcaatcttttggaagcttactatataatatttagttttcacttttgttctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttcccatgtcaatcttttggaagcttactatataatatttagttttcacttttgttctg 501
Query: 244 agataattcagatagtatatgaaattactaagctaatataaacatacattctacattaaa 303
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 500 agataattcagatagtatatgaaattacaaagctaatataaacatacattctacattaaa 441
Query: 304 cacccagtttcctcaatgcttatatagaatatatagtgtaatatatcaaaagcaagactt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cacccagtttcctcaatgcttatatagaatatatagtgtaatatatcaaaagcaagactt 381
Query: 364 tggtaactgaaacagtatatgtgtagctccatgctattttatcatgtgtactgatttatg 423
|||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 380 tggtaattgaaacagtatatgtgtagctccatgctattttatcatgtgtactga-ttatg 322
Query: 424 caattatagaactacctcagtaccacagaggtcttgttgatttatactcatccagctacc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caattatagaactacctcagtaccacagaggtcttgttgatttatactcatccagctacc 262
Query: 484 atgtcctctgctagtctactaccctaaccaacttttctccagctctatagttttgagaat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtcctctgctagtctactaccctaaccaacttttctccagctctatagttttgagaat 202
Query: 544 ggaagcatgtcagaaataagcattggagatgtttttcactcagtataatacccttgtgtt 603
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
Sbjct: 201 ggaagcatgtcagaaataagcattggagatgtttttcactcagtgtaatactcttgtgat 142
Query: 604 ctgtcccagtcattgcatctgttcactgctgagtatggatacaccatattttgtatagct 663
|||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
Sbjct: 141 ctgtcccagtcattgcatctcttcactgctgagtgtggatacaccatattttgtatagtt 82
Query: 664 ggt 666
|||
Sbjct: 81 ggt 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space: 692736
Effective search space used: 692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_j06.g1 MSMg01no489_j06.g1 CHROMAT_FILE:
MSMg01no489_j06.g1 PHD_FILE: MSMg01no489_j06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:52 2005
(648 letters)
>mm_chr10_29757998_29759045
Length = 1048
Score = 1123 bits (581), Expect = 0.0
Identities = 628/647 (97%), Gaps = 6/647 (0%)
Strand = Plus / Plus
Query: 2 aaaaatggagtcctttctgctagctcatgatggaaatgaaaacagaagaaaaatactgac 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 208 aaaaatggagtcctttctgctagctcatgatggaaatgagaacagaagaaaaatactgac 267
Query: 62 tacactttggtatttcaaagatataatctattggcttcaacatatacagatagataatat 121
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 268 tacactttggtatttcaaagatataatctattggcttcaacatatacaggtagataatat 327
Query: 122 atgcatacaatacacaaacacacacatgtatatatgttcccttttatattgaatattttc 181
||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 328 atgcatacaat------acacacatatgtatatatgtccccttttatattgaatattttc 381
Query: 182 catgaataatctgaggaaatgcacacattcttgtgactctgcagtaatttcctaccatgt 241
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 382 catgaataatctgaggaaatgtacacattcttgtgactctgcagtaatttcctaccaagc 441
Query: 242 tttcttgccttctgtccattcccaggctacatggttcaacaccaaggtgaggctcagcac 301
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 442 ttccttgccttctgtccattcccacgctacatggttcaacaccaaggtgaggctcagcac 501
Query: 302 atatctttcacaattttacattttactctttcgtaactccacatatacatgtaaactatt 361
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 502 atatctttcacaattttacattttactctttcgtaatttcacatatacatgtaaactatt 561
Query: 362 ttaagcatttgcaagccatgttgtcctctctttccccttcctactcctgctgaactcctt 421
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 562 ttaagcatttgcaagccatgttgtcctctctttccccttcctacttctgctgaactcctt 621
Query: 422 cctgagttcctatctagtgctatgtctcgtgtgtgtgactcagtaagttcaatcacattt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 cctgagttcctatctagtgctatgtctcgtgtgtgtgactcagtaagttcaatcacattt 681
Query: 482 gcttacatgggcatggagagaggttatttctaaaaccctcagccattgtaacataacaat 541
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gcttatatgggcatggagagaggttatttctaaaaccctcagccattgtaacataacaat 741
Query: 542 tactataccactgaagaaaataactctaccttcccaaggacactaactgccagtgactac 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tactataccactgaagaaaataactctaccttcccaaggacactaactgccagtgactac 801
Query: 602 tcagagggtatacccttctgaggtcctcccctttctttcatggacag 648
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tcagagggtatacccttctgaggtcctcccctttctttcatggacag 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
