Query= MSMg01no490_c14.b1 MSMg01no490_c14.b1 CHROMAT_FILE:
MSMg01no490_c14.b1 PHD_FILE: MSMg01no490_c14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:40 2005
(589 letters)
>mm_chr10_110159782_110160769
Length = 988
Score = 760 bits (393), Expect = 0.0
Identities = 463/489 (94%), Gaps = 7/489 (1%)
Strand = Plus / Minus
Query: 7 agctatagtcttcctctgcttcgtttgactttatctggggtcactcactgcaaggatgaa 66
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 487 agctatagtcttcctctgtttcgtttgaccttatctggggtcactcactgcaaggatgaa 428
Query: 67 ttcaactgggattctagccagagctgcaacatgtaaagttctttgctttccagtctctat 126
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 427 ttcaactgggattctagccagagctgcaacatgtaaagttctttgctttccagtctatat 368
Query: 127 cattctgtacttagctcaaactcccttatatcagagtgtggctgggaaagtttgggtcag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 cattctgtacttagctcaaactcccttatatcagagtgtggctgggaaagtttgggtcag 308
Query: 187 ctttccatccaatctttggtttatctttctactctagtctcctttccttaaagaattcaa 246
|||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||| |
Sbjct: 307 ttttccatccaatctctggtttatcttcctactctagtatcctttccttaaagaattcga 248
Query: 247 atgtacattttgatgtgtattgtgaagaaacatttgtgggttttttt-----gccagtaa 301
||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||
Sbjct: 247 atgtacattttgatgtgtattatgaagaaacatttg-gggttttttttttttgccagtaa 189
Query: 302 atttcagaatctagatgaaattgatggttgctaagatatggtaaatttacttaaactgac 361
|||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 188 atttcaaaatctagatgaaattggtggttggtaagatatggtaaatttacttaaactgac 129
Query: 362 tctagtgggattaggaaaactccaatagggaggattttataagttccaagatttattctc 421
|| ||||| |||||||||||||||||||||||||||| | | ||||||||||||||||||
Sbjct: 128 tcaagtggaattaggaaaactccaatagggaggattt-acaggttccaagatttattctc 70
Query: 422 ttctcagagatttggtagtggctttgtgtgagtgagtgtgtgcgagcgtgtgagtgtgtg 481
||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 69 ttctcagagatttggtagtggctttgtgtgagtgagtgtgtgcgagcatgtctgtgtgtg 10
Query: 482 tgtgtgtgt 490
|||||||||
Sbjct: 9 tgtgtgtgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 988
Length adjustment: 10
Effective length of query: 579
Effective length of database: 978
Effective search space: 566262
Effective search space used: 566262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_c14.g1 MSMg01no490_c14.g1 CHROMAT_FILE:
MSMg01no490_c14.g1 PHD_FILE: MSMg01no490_c14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:40 2005
(136 letters)
>mm_chr10_110006960_110007495
Length = 536
Score = 240 bits (124), Expect = 3e-68
Identities = 133/136 (97%)
Strand = Plus / Plus
Query: 1 agtaatgcctagaaatctctcaaatggtagtttatgtaaaaaacatagtttatggtttat 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 agtaatgcctagaaatctctcaaatggtagtttatgtaaaaaccatagtttatggtttat 260
Query: 61 aaaagcatagatagagccttacatgtgctctatggttttatttaaatgtgtatatgtgtg 120
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 261 aaaagcatagatagagccttacatatgctctatggttttatttaaatatgtatatgtgtg 320
Query: 121 tgtgtggaggggggag 136
||||||||||||||||
Sbjct: 321 tgtgtggaggggggag 336
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 536
Length adjustment: 8
Effective length of query: 128
Effective length of database: 528
Effective search space: 67584
Effective search space used: 67584
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
