Query= MSMg01no490_e08.b1 MSMg01no490_e08.b1 CHROMAT_FILE:
MSMg01no490_e08.b1 PHD_FILE: MSMg01no490_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:49 2005
(631 letters)
>mm_chr10_3381730_3382760
Length = 1031
Score = 1118 bits (578), Expect = 0.0
Identities = 618/636 (97%), Gaps = 8/636 (1%)
Strand = Plus / Plus
Query: 4 ggaattccacagttctcatatggtgctcatctacacagtgtcacgtggtcaccatccacg 63
|||||||||||| ||| |||| ||||||||||||||||||||| |||||||| |||||||
Sbjct: 196 ggaattccacagctctaatatagtgctcatctacacagtgtcaagtggtcactatccacg 255
Query: 64 agatgctatgtcatttaggaagtctgtgttgatcttttctgtgaagagaaagagatctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agatgctatgtcatttaggaagtctgtgttgatcttttctgtgaagagaaagagatctca 315
Query: 124 gctttgctcactaatacatcctcacacacggggtatagtgaggaggcctcaagacctctg 183
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 316 gctttgctcactaatacatcctcacacacggggtacagtgaggaggccccaagacctctg 375
Query: 184 ttgactaagtggatgtatggaagccttcagggagagagagaaaagtgagcttaagggaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttgactaagtggatgtatggaagccttcagggagagagagaaaagtgagcttaagggaag 435
Query: 244 gattaatacaaatgattgacactggaggtagga--------cttcatcctgtgtccttga 295
|||||||||||||||||||||||||||| |||| ||| |||||||||||||||
Sbjct: 436 gattaatacaaatgattgacactggaggcaggaccagcagccttgatcctgtgtccttga 495
Query: 296 tgtttgaactccaccagttttgacaaaggtaagactttgtttctgccttgtgatagcaag 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgtttgaactccaccagttttgacaaaggtaagactttgtttctgccttgtgatagcaag 555
Query: 356 tgctcagtaatgctctactgagatgggggatgtcagaggtgctgggaaaggtggatgggc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgctcagtaatgctctactgagatgggggatgtcagaggtgctgggaaaggtggatgggc 615
Query: 416 tgattttcaggaagaaagataggtgtgaggtcacagaacttaagactggtaagcttgcac 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tgattttcaggaagaaagataggtgtgaggtcacagaacttaagactggtaagcttgcac 675
Query: 476 aatcgctcaggacaagccttttaaaaatcatattaggattctggagaaattagcagatcc 535
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 aatggctcaggacaagccttttaaaaatcatattaggattctggagaaattagcagatcc 735
Query: 536 tgatactcaactgtcaggtgactttttaaagttagaactagttaaaagggaatgataaga 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tgatactcaactgtcaggtgactttttaaagttagaactagttaaaagggaatgataaga 795
Query: 596 ttcaagtcagttattttagttaatggatcaggcagg 631
||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttcaagtcagttattttagttaatggatcaggcagg 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_e08.g1 MSMg01no490_e08.g1 CHROMAT_FILE:
MSMg01no490_e08.g1 PHD_FILE: MSMg01no490_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:49 2005
(635 letters)
>mm_chr10_3558155_3559188
Length = 1034
Score = 1212 bits (627), Expect = 0.0
Identities = 633/635 (99%), Gaps = 1/635 (0%)
Strand = Plus / Minus
Query: 1 agttaaactttctacaaccaaatgggagcggggacatttatttccagtatttatagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 agttaaactttctacaaccaaatgggagcggggacatttatttccagtatttatagttaa 775
Query: 61 aactatgggtatgcgcatgcgcatgcatatgcatacacagtgttgagacgaaaccacact 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 aactatgggtatgcgcatg-gcatgcatatgcatacacagtgttgagacgaaaccacact 716
Query: 121 actgctgaatttacgattgtattccttcagaagcacttgtgaacttagacatgagatcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 actgctgaatttacgattgtattccttcagaagcacttgtgaacttagacatgagatcta 656
Query: 181 acattttttaaatgcattcttgctcctcaaggatcttgcttaaggccatttcacactcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 acattttttaaatgcattcttgctcctcaaggatcttgcttaaggccatttcacactcaa 596
Query: 241 aagagctgttgagtttcttttggattctctatagtgggaagaaaaaacatttctgcttga 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 aagagctgtggagtttcttttggattctctatagtgggaagaaaaaacatttctgcttga 536
Query: 301 ttcagtaacctgctccccagaagctcgggagagtggaggcagtgcgaaagcttaggataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttcagtaacctgctccccagaagctcgggagagtggaggcagtgcgaaagcttaggataa 476
Query: 361 atcttcctaagcaggtccaggagagtagacctggcatgggtagtgggttccttatttaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 atcttcctaagcaggtccaggagagtagacctggcatgggtagtgggttccttatttaca 416
Query: 421 ggttatcacccctcctccctcacatctctaatgtgttcttatgcttcttcttcactagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggttatcacccctcctccctcacatctctaatgtgttcttatgcttcttcttcactagga 356
Query: 481 aaaaaatcagatgcaaatagaccttctaacctaagagaaattgaaggagtgggggcacat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 aaaaaatcagatgcaaatagaccttctaacctaagagaaattgaaggagtgggggcacat 296
Query: 541 gaaacaggcttctttcacaaaaattttctcttttagaaaaagacaattgtttctttgaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gaaacaggcttctttcacaaaaattttctcttttagaaaaagacaattgtttctttgaac 236
Query: 601 aggtttgtggggttgattttttgaggaactaaagg 635
|||||||||||||||||||||||||||||||||||
Sbjct: 235 aggtttgtggggttgattttttgaggaactaaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1034
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1024
Effective search space: 640000
Effective search space used: 640000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
