Query= MSMg01no490_j12.b1 MSMg01no490_j12.b1 CHROMAT_FILE:
MSMg01no490_j12.b1 PHD_FILE: MSMg01no490_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:13 2005
(617 letters)
>mm_chr10_30727364_30728377
Length = 1014
Score = 1093 bits (565), Expect = 0.0
Identities = 603/621 (97%), Gaps = 11/621 (1%)
Strand = Plus / Plus
Query: 1 ggatggaaaacactacaacttcacacttggattcctcagactgaatcttgtaaatccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggatggaaaacactacaacttcacacttggattcctcagactgaatcttgtaaatccatc 260
Query: 61 tactaaattcctttcattcaactggtatcctctagagaagcctggctaatgttcttactt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||
Sbjct: 261 tactaaattcctttcattcaactggtatcctctagagaagcctggctaatatgcttgctt 320
Query: 121 cttgtcctgattatgtgtttatccatttccagactcttacatgaaattacatgaagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgtcctgattatgtgtttatccatttccagactcttacatgaaattacatgaagatca 380
Query: 181 gaatcacagatacacttcaattgcccagaataatatggataactagacaccttatac--- 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaatcacagatacacttcaattgcccagaataatatggataactagacaccttatacaga 440
Query: 238 -tttttcactggaggaataaatggatggaaccataagatagagataaatatttaatgagt 296
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ct----cactggaggaataaatggatggaaccataagatagagataaatatttaatgagt 496
Query: 297 atgcaaagatctgggttcctggggcttcagaaaacgtttttttctaacaggaaaaatata 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atgcaaagatctgggttcctggggcttcagaaaacgtttttttctaacaggaaaaatata 556
Query: 357 gtgcaggaaagtactgaaactttctagaaagaagactaaaaagaagagaaaaggaacagt 416
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 557 gtgcaggaaagtactgaaactttctagaaagaagactaaaaaggagagaaaaggaacagt 616
Query: 417 ggaagaagacagccctactaagttttccttatgtttcatttttggttgattgatgtgggt 476
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggaaga---cagccctactaagttttccttatgtttcatttttggttgattgatgtgggt 673
Query: 477 gtcaagaatattttgcttggggagttcagacttgttcttgttattcacaagactctgagc 536
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 674 gtcaagaatattttacttggggagttcagactggttcttgttattcacaagactctgagc 733
Query: 537 aactgagaaaagctgtgtggatcaagttccctgcctcctgcacaggcatttcctgatgcg 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 734 aactgagaaaagctgtgtggatcaagttccctgcctcctgcacaggcatttcctgatgtg 793
Query: 597 ctatcaggtgtcctttcctta 617
|||||||||||||||||||||
Sbjct: 794 ctatcaggtgtcctttcctta 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1014
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1004
Effective search space: 609428
Effective search space used: 609428
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_j12.g1 MSMg01no490_j12.g1 CHROMAT_FILE:
MSMg01no490_j12.g1 PHD_FILE: MSMg01no490_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:13 2005
(289 letters)
>mm_chr10_30883322_30884010
Length = 689
Score = 449 bits (232), Expect = e-130
Identities = 274/288 (95%)
Strand = Plus / Minus
Query: 1 gcttgggctggtttctgagggaggggaagggccttatcagaggcttgaaacacccccctg 60
|||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 488 gcttgggctgctttctgagggaggggaagggccttatcagaggcttgaaagatttccctg 429
Query: 61 tgtttggcattcttagcaaatggatttcagactggatcatgtaccttctggatctgcaag 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgtttggcattcttaggaaatggatttcagactggatcatgtaccttctggatctgcaaa 369
Query: 121 aagatgtgagaagtaattagaacagggaattctgaagggaagggagccagcactgtgaga 180
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 368 aagatgtgagaagtaattagaacaggtaatgctgaagggaagggagccagcactgtgaga 309
Query: 181 ggagctgtaaatagtagagggtgaggactgaggtaacagtggaacatccattggcagttt 240
||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 308 ggagctgtaaataacagagggtgaggactgaggaaacagtggaacatccattgacagttt 249
Query: 241 aaggaaacccccaatgccatttccagtgaacccaaaaaatccaaccaa 288
|||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 248 aaggaaacccccaatgccatttcctgtgaacccaaaaaatccaaccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
