Query= MSMg01no490_m09.b1 MSMg01no490_m09.b1 CHROMAT_FILE:
MSMg01no490_m09.b1 PHD_FILE: MSMg01no490_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:27 2005
(672 letters)
>mm_chr10_106859092_106860162
Length = 1071
Score = 1253 bits (648), Expect = 0.0
Identities = 666/672 (99%), Gaps = 1/672 (0%)
Strand = Plus / Minus
Query: 1 ttgccttagaatcacagctgggacaaggtacggagtctgcttgcactgtctattaccttg 60
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 871 ttgccttagaatcacagctgggacaaggaacagagtctgcttgcactgtctattaccttg 812
Query: 61 atcaaaggaagaaactgaaatttacttcattgggtccttgttgaaaaattacaaccactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 atcaaaggaagaaactgaaatttacttcattgggtccttgttgaaaaattacaaccactt 752
Query: 121 ttccctaacttttaacaccccacttatcgtatctatgttgaactgcatggaagcacagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ttccctaacttttaacaccccacttatcgtatctatgttgaactgcatggaagcacagtc 692
Query: 181 ttttctttaaatgaatgacatcagacatgtcggagactctgtatgtgactcttgggaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ttttctttaaatgaatgacatcagacatgtcggagactctgtatgtgactcttgggaata 632
Query: 241 gagaagtttatgtaaaattcatggttgaatttgttcttccctttccatcttgcttcaggg 300
|||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gagaagttca-gtaaaaatcatggttgaatttgttcttccctttccatcttgcttcaggg 573
Query: 301 aaatgtcagagatgcgctgggggtttctgtaagtctttggaggggtgtgtgtgtgtccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaatgtcagagatgcgctgggggtttctgtaagtctttggaggggtgtgtgtgtgtccct 513
Query: 361 tttgattaaaattctagagaaatacttacatttcaatgagctaaatttcactaaagagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttgattaaaattctagagaaatacttacatttcaatgagctaaatttcactaaagagaa 453
Query: 421 ccagccatttgtatgtaagaccatggagacatataacctatcccttggcttctgtgcgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ccagccatttgtatgtaagaccatggagacatataacctatcccttggcttctgtgcgta 393
Query: 481 tgatggattgcttcattttgacaaacaacctggcaaacattcatcagcagtacacgttgt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 392 tgatggattgcttcattttgacaaacaacctggcaaacattcatcagcagtacatgttgt 333
Query: 541 acaaatgaagcaaaaaattcaaagacttctaaaaaacaccagcatgaagtatctgattat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acaaatgaagcaaaaaattcaaagacttctaaaaaacaccagcatgaagtatctgattat 273
Query: 601 ttcatggttgcttctgacaacacttgtactgatgtgaaatcatatattaagtttggtatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttcatggttgcttctgacaacacttgtactgatgtgaaatcatatattaagtttggtatt 213
Query: 661 aactaaacactt 672
||||||||||||
Sbjct: 212 aactaaacactt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1071
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1061
Effective search space: 702382
Effective search space used: 702382
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_m09.g1 MSMg01no490_m09.g1 CHROMAT_FILE:
MSMg01no490_m09.g1 PHD_FILE: MSMg01no490_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:27 2005
(673 letters)
>mm_chr10_106687391_106688463
Length = 1073
Score = 1172 bits (606), Expect = 0.0
Identities = 656/674 (97%), Gaps = 4/674 (0%)
Strand = Plus / Plus
Query: 4 tgcatttcatacataaaaccatgggacatgttcctgttctgtatggtctcaaaatagtac 63
|||||||||||||||||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct: 200 tgcatttcatacataaaaccatgggacaggttcctgttctgtaaggtctcgaaatagtac 259
Query: 64 tgaaaagatcaggtgcaagcagcctagggcatctctccattgtttctagaaatagtgttg 123
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 260 tgaaaagatcaggtgcaagcagcctagggcatctctccattgtttctaggaatagtgttg 319
Query: 124 acatcgatctactcaagcaaaactt-aatacatgcccagtaagcaccacctactgtgtgc 182
|||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct: 320 acatcgatctactcaagcaaaatttaaatacacgcccagtaagcaccacctactgtgtgc 379
Query: 183 tgggcaacgtgtatctcctttattacctctttccaagaaacattatatttgtgtacctca 242
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 380 tgggcaacgtgtatctcctttattacctctttccaagaaacatcatatttgtgtacctca 439
Query: 243 tgtttacagtggttggcttactacaatagagtggagtcaattcttcaggcataagaaatg 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agtttacagtggttggcttactacaatagagtggagtcaattcttcaggcataagaaatg 499
Query: 303 ttttaaaattctcatctatcatttgtgcaccattaggaattctaaagtcatcataaagtt 362
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 ttttaaaattctcatctatcatttgtgcaccattaggaattctatcgtcatcataaagtt 559
Query: 363 gtgaggaatagcaaacacatctattgcatggcaaatactgcttcagatcttttacatcat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gtgaggaatagcaaacacatctattgcatggcaaatactgcttcagatcttttacatcat 619
Query: 423 ctcatgtgatgcccccc---aaaacgacttattgcttgcaatcacatgtataggtgcaat 479
||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 620 ctcatgtgatgcccccccccaaaacgacttcttggttgcaatcacatgtataggtgcaat 679
Query: 480 cacactgtagtttcacagatgtggaaatgaagcaagagatagcaaattgtttggctaata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cacactgtagtttcacagatgtggaaatgaagcaagagatagcaaattgtttggctaata 739
Query: 540 ttacacggccactaaattatggaccagggactcacaaaaaagcatgctgaattcaaacta 599
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttacaaggccactaaattatggaccagggactcacaaaaaagcatgctgaattcaaacta 799
Query: 600 aggactctgttaaaactacactttcactgagtgatgggtaaattattagccagggattta 659
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 aggactctgttaaagctacactttcactgagtgatgggtaaattattagccagggattta 859
Query: 660 actttgcttttacc 673
||||||||||||||
Sbjct: 860 actttgcttttacc 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|