XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAATAAAG
TCCCACATGAAAAAGGAGATAATGTCCCAACTAGCCATCTTAAACCACAG
AGTAAAACCTTCACTGTCAGAAGGGGGTTACAACTTGTTGGGCCATTGGC
CAGTGGAAACCCTCTCTATATCACAGGTTACTGAGAAAGTTATTGATCTT
TCTCAACAATCTGAGACTACAGGCCTATTGTGGAAGACAACACTCACCAA
GCCATAAAACACAGAGAAATCGAACTGACTCCTAAATAGAAGTTTCACTG
CTAGTGATTTTTATTTGTGGCCCTAGAAGGCATTCTGCACACTACCAGAA
GGGGAAAGATCACCATCAATATTCCTAGCTATGAACCCTATTTGTATTCA
CATTTATAACAGTAACTTGCCTACCAGACATACTGTTGCAATAGTCGCAC
AAAGGTTATAGGATGACCAAATCATTTTGGGGGCCTGGGGGAGTTTGTTT
GTTTGTTTGTTTACTTTGTTGTTGTTTACATTGGAGGTCACAGCCACTGC
ATGGGATGAAACCCACCTTTGACACTGCTCAAGAACCTGCGATTAGATAG
TTCTTGGCTTGGGGGAGAACAAAATACTATTCTGCCAAAGGAACTTAGCA
ACAATAAAGACTCTATTGCAAAAATGGCATATTGCTATGCCCATAGGGCT
GCACTCGGCTCACATCAGAGGAGGTTACTTCTGCACTGGAAGGGAATN

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCCAAAATTCTCCTTTCCTTTGCTTTTACTCATTGAAATGATAATC
TTTGCACTCACATATCCCTCTTAGCACAATGCCTGCTTCTGCTCTGATGT
CATGCCCTCATGTGGCCTTCCAGAACTCACTGTGTAAGTGGCTTTTGCTC
CTGTTTCCCTATGTCCTATTCTCTGTAGGTATTGTTCTATGGAGTCCCAC
TGTTTTCTCACCTATTTAAATCTTTTGTCTTTTCTACCCTAACTGCAAAG
CAAGCACATCTCTTATTAGAGACCTTGTCGGCCTTTTTTTCCTCTGTATT
CCCTATTCTCAAGTACATAGCAGGTATGTGACAGAGTGGGCAGTCAAACT
GTATCATCTTTTAGTCCTGCCTTGTTTATTGTATTTTGTAATTGCACTTT
ATCTTTTCATTGACTTTTTAAAACTTGTTATTTAAATGCGAGATTACTAT
TTTAAGCACTATTTGGATATGTATGTGAGCACTGATTTGTGGCATTAATG
ATTATCTCTGGGAAATTCAATTATGCCTTCTAATAGCTTTTCAATTGACA
ATCAAACACTCTGAAAAGAGGCCATTTTGACAGCTCAGTATTCATATGTT
TGTTTGGGTTTTTTTTTTTTTTTGCTTACATTTATTTATTTTATAGCATT
GGTTAAATCTTTTTTCCCTGTATTTTTCTAGAGCTTA

Query= MSMg01no491_a15.g1 MSMg01no491_a15.g1 CHROMAT_FILE:
MSMg01no491_a15.g1 PHD_FILE: MSMg01no491_a15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:49 2005
         (411 letters)



>mm_chr10_106718397_106719202
          Length = 806

 Score =  716 bits (370), Expect = 0.0
 Identities = 396/410 (96%), Gaps = 11/410 (2%)
 Strand = Plus / Minus

                                                                       
Query: 2   gaccttgtcggcctttttttcctctgtattccctattctcaagtacatagcaggtatgtg 61
           ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gaccttgtcagcc-ttttttcctctgtattccctattctcaagtacatagcaggtatgtg 485

                                                                       
Query: 62  acagagtgggcagtcaaactgtatcatcttttagtcctgccttgtttattgtattttgta 121
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 acacagtgggcagtcaaactgtatcatcttttagtcctgccttgtttattgtattttgta 425

                                                                       
Query: 122 attgcactttatcttttcattgactttttaaaacttgttatttaaatgcgagattactat 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 attgcactttatcttttcattgactttttaaaacttgttatttaaatgcgagattactat 365

                                                                       
Query: 182 tttaagcactatttggatatgtatgtgagcactgatttgtggcattaatgattatctctg 241
           |||||||||||||||||    |||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tttaagcactatttgga----tatgtgagcactgatttgtggcattaatgattatctctg 309

                                                                       
Query: 242 ggaaattcaattatgccttctaatagcttttcaattgacaatcaaacactctgaaaagag 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ggaaattcaattatgccttctaatagcttttcaattgacaatcaaacactctgaaaagag 249

                                                                       
Query: 302 gccattttgacagctcagtattcatatgtttgtttgggtttttttttttttttgcttaca 361
           ||||||||||||||||||||||||||||||||||||||       |||||||||||||||
Sbjct: 248 gccattttgacagctcagtattcatatgtttgtttggg------gttttttttgcttaca 195

                                                             
Query: 362 tttatttattttatagcattggttaaatcttttttccctgtatttttcta 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tttatttattttatagcattggttaaatcttttttccctgtatttttcta 145


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 806
Length adjustment: 9
Effective length of query: 402
Effective length of database: 797
Effective search space:   320394
Effective search space used:   320394
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)