Query= MSMg01no491_c16.b1 MSMg01no491_c16.b1 CHROMAT_FILE:
MSMg01no491_c16.b1 PHD_FILE: MSMg01no491_c16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:59 2005
(657 letters)
>mm_chr10_29886145_29887201
Length = 1057
Score = 874 bits (452), Expect = 0.0
Identities = 464/468 (99%)
Strand = Plus / Minus
Query: 1 gccctagtgatgttcctggggagaaacatatttttctctacctgaaactttatctcactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gccctagtgatgttcctggggagaaacatatttttctctacctgaaactttatctcactc 409
Query: 61 agctatgagaactcatttacattgtaaagtcaattaaagtgcatgacactatcttcatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agctatgagaactcatttacattgtaaagtcaattaaagtgcatgacactatcttcatgg 349
Query: 121 cttgccccattgagttccacattgctcagctccggaaatcaaaacatccaagacttttta 180
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 348 cttaccccattgagttccacatttctcagctccggaaatcaaaacatccaagacttttta 289
Query: 181 cttatatcaaaaactgttacactgttgattttaagaagcaagtttggaagtcagagccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 cttatatcaaaaactgttacactgttgattttaagaagcaagtttggaagtcagagccat 229
Query: 241 acttttctgttttctcttttcttgctttacaaaacaacaaaacaagtaaacaatcacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 acttttctgttttctcttttcttgctttacaaaacaacaaaacaagtaaacaatcacaaa 169
Query: 301 ataaaaacaaacaaaaacaataaaaggcaagcaaacaaacaaataaaaacaaaacaacaa 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ataaaaacaaacaaaagcaataaaaggcaagcaaacaaacaaataaaaacaaaacaacaa 109
Query: 361 acaaaaacccaaagcaaaacaaaacaaaataacttgtttttaaataagaaaaaaaattca 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 108 acaaaaacccaaagcaaaacaaaacaaaataacttgtttttaaataagaaagaaaattca 49
Query: 421 tggggtagtgaactaggaatcacatcacacgaatttatttttgacttg 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 tggggtagtgaactaggaatcacatcacacgaatttatttttgacttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_c16.g1 MSMg01no491_c16.g1 CHROMAT_FILE:
MSMg01no491_c16.g1 PHD_FILE: MSMg01no491_c16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:59 2005
(624 letters)
>mm_chr10_29757997_29759020
Length = 1024
Score = 1114 bits (576), Expect = 0.0
Identities = 608/622 (97%), Gaps = 6/622 (0%)
Strand = Plus / Plus
Query: 3 aaaaatggagtcctttctgctagctcatgatggaaatgaaaacagaagaaaaatactgac 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 209 aaaaatggagtcctttctgctagctcatgatggaaatgagaacagaagaaaaatactgac 268
Query: 63 tacactttggtatttcaaagatataatctattggcttcaacatatacagatagataatat 122
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 269 tacactttggtatttcaaagatataatctattggcttcaacatatacaggtagataatat 328
Query: 123 atgcatacaatacacaaacacacacatgtatatatgttcccttttatattgaatattttc 182
||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 329 atgcatacaat------acacacatatgtatatatgtccccttttatattgaatattttc 382
Query: 183 catgaataatctgaggaaatgcacacattcttgtgactctgcagtaatttcctaccaagc 242
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catgaataatctgaggaaatgtacacattcttgtgactctgcagtaatttcctaccaagc 442
Query: 243 ttccttgccttctgtccattcccaggctacatggttcaacaccaaggtgaggctcagcac 302
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 443 ttccttgccttctgtccattcccacgctacatggttcaacaccaaggtgaggctcagcac 502
Query: 303 atatctttcacaattttacattttactctttcgtaatttcacatatacatgtaaactatt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atatctttcacaattttacattttactctttcgtaatttcacatatacatgtaaactatt 562
Query: 363 ttaagcatttgcaagccatgttgtcctctctttccccttcctactcctgctgaactcctt 422
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 563 ttaagcatttgcaagccatgttgtcctctctttccccttcctacttctgctgaactcctt 622
Query: 423 cctgagttcctatctagtgctatgtctcgtgtgtgtgactcagtaagttcaatcacattt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 cctgagttcctatctagtgctatgtctcgtgtgtgtgactcagtaagttcaatcacattt 682
Query: 483 gcttacatgggcatggagagaggttatttctaaaaccctcagccattgtaacataacaat 542
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcttatatgggcatggagagaggttatttctaaaaccctcagccattgtaacataacaat 742
Query: 543 tactataccactgaagaaaataactctaccttcccaaggacactaactgccagtgactac 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tactataccactgaagaaaataactctaccttcccaaggacactaactgccagtgactac 802
Query: 603 tcagagggtatacccttctgag 624
||||||||||||||||||||||
Sbjct: 803 tcagagggtatacccttctgag 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
