Query= MSMg01no492_e03.b1 MSMg01no492_e03.b1 CHROMAT_FILE:
MSMg01no492_e03.b1 PHD_FILE: MSMg01no492_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:26 2005
(334 letters)
>mm_chr10_91946253_91946986
Length = 734
Score = 594 bits (307), Expect = e-174
Identities = 321/327 (98%), Gaps = 6/327 (1%)
Strand = Plus / Plus
Query: 8 gaattccttctgtcc--caagtgctcagacctcagcttccacctcctgtccagattgtca 65
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattccttctg-ccaacaagtgctcagacctcagcttccacctcctgtccagattgtca 266
Query: 66 gataattaatgatcaaccaagaatgaccaagagttcaaccaagcatgagggacagaccca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gataattaatgatcaaccaagaatgaccaagagttcaaccaagcatgagggacagaccca 326
Query: 126 acaagtttaagatatgcttaatgctgtctagaaacttgtaattaagttaggaaaattatc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 acaagtttaagatatgcttaatgctgtctagaaacttgtaattaagttaggaaaattatc 386
Query: 186 cagggatggttcagtgagtattatgtgcttcttggtggatttattgatcttgcctctata 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cagggatggttcagtgagtattatgtgcttcttggtggatttattgatcttgcctctata 446
Query: 246 ccatagcccaaaggatatgtgttttatcctattatatccatagtatcatgcacaagttag 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccatagcccaaaggatatgtgttttatcctattatatccatagtatcatgcacaagttag 506
Query: 306 cattcaataccg-gnntgtgtgtatgt 331
|||||||||||| | |||||||||||
Sbjct: 507 cattcaataccgcg--tgtgtgtatgt 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_e03.g1 MSMg01no492_e03.g1 CHROMAT_FILE:
MSMg01no492_e03.g1 PHD_FILE: MSMg01no492_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:26 2005
(637 letters)
>mm_chr10_91994872_91995908
Length = 1037
Score = 1232 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Minus
Query: 1 atattctcaggcaatagcgtcagaactctgctgctgtcatgtttgaagtcatgttctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 atattctcaggcaatagcgtcagaactctgctgctgtcatgtttgaagtcatgttctcct 778
Query: 61 aggatgacatcttctctatggcgtgattatgtatttcctgagagctcgattctgtgtctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 aggatgacatcttctctatggcgtgattatgtatttcctgagagctcgattctgtgtctg 718
Query: 121 taacacttgactgtccacgtctgttgatttaaagcatagtgtaagaaatactaatgctga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 taacacttgactgtccacgtctgttgatttaaagcatagtgtaagaaatactaatgctga 658
Query: 181 attcacctgaagctgctttttaaaaatgcaaatgtaatgtttgctcagaattccctaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attcacctgaagctgctttttaaaaatgcaaatgtaatgtttgctcagaattccctaata 598
Query: 241 ggacacgaagctgaatattaacaataagatgctttttctttgtcttgttaggatttatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ggacacgaagctgaatattaacaataagatgctttttctttgtcttgttaggatttatca 538
Query: 301 aataccaggtactttcaacattagaatccctaaaagtcaacgtgtatctccatagtgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 aataccaggtactttcaacattagaatccctaaaagtcaacgtgtatctccatagtgaga 478
Query: 361 ttaatggctttagagtgttctttccttttccagactacttttcccatacttttcatcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttaatggctttagagtgttctttccttttccagactacttttcccatacttttcatcaga 418
Query: 421 gcaataatcaattagtaaatgcacagtaaatattttagaattgatctgagtccctttacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gcaataatcaattagtaaatgcacagtaaatattttagaattgatctgagtccctttacc 358
Query: 481 aacccaaatatgagaaataattgctggagcattactctaatgtcgatggttattgttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 aacccaaatatgagaaataattgctggagcattactctaatgtcgatggttattgttgtt 298
Query: 541 cttaagaagaacagtgctcagataactatcgagcagaagcaaagtcagtctgtattaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 cttaagaagaacagtgctcagataactatcgagcagaagcaaagtcagtctgtattaaaa 238
Query: 601 agtggaatgaatattaacagaaagtctgcaagcattg 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 agtggaatgaatattaacagaaagtctgcaagcattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
