Query= MSMg01no493_a03.b1 MSMg01no493_a03.b1 CHROMAT_FILE:
MSMg01no493_a03.b1 PHD_FILE: MSMg01no493_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:23 2005
(236 letters)
>mm_chr10_69390575_69391209
Length = 635
Score = 418 bits (216), Expect = e-121
Identities = 231/236 (97%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 1 gtatgcaaatgtcttacatagcgtaacaagaaaggtcttccaatacagagcaagctactt 60
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gtatgcaaatttcttacacagcgtaacaagaaaggtcttccaatacagagcaagctactt 376
Query: 61 ttgaaacatgagactcgggttggtttttgcccatttatcagggagctcatgtggtactct 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 375 ttgaaacatgagactcgggttggtttttgcccatttatcggggagctcatgtggtactct 316
Query: 121 gctggaagccaactgcaaagagggagatgggaagagcaaagattgacctgttctagcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gctggaagccaactgcaaagagggagatgggaagagcaaagattgacctgttctagcaca 256
Query: 181 cgagagagactacacactgcaaatggtgaggaaaaaaaaaaacaaaaaacaaacaa 236
||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 255 cgagagagactacacactgcaaatgatgaggaaaaaaaaaa-caaaaaacaaacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 635
Length adjustment: 9
Effective length of query: 227
Effective length of database: 626
Effective search space: 142102
Effective search space used: 142102
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no493_a03.g1 MSMg01no493_a03.g1 CHROMAT_FILE:
MSMg01no493_a03.g1 PHD_FILE: MSMg01no493_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:23 2005
(175 letters)
>mm_chr10_69226031_69226605
Length = 575
Score = 273 bits (141), Expect = 5e-78
Identities = 163/171 (95%), Gaps = 2/171 (1%)
Strand = Plus / Plus
Query: 1 ctgtcatctgttctttctttttaccaaattattcttcattgctaatttctccccagtgaa 60
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 201 ctgtcatctgttctttctttttaccatattattcttcattactaatttctccccagtgaa 260
Query: 61 aagcctatgagggcttagcaggaagaatatttaaaaagcataattaaggtgtgcgtgtgt 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 261 aagcctatgagggcttagcaggaagaatttttaaaaagcataattaaggtgtgcgtttgt 320
Query: 121 gtgtgagtgtgtgtgtgtgtgagtgtgtgtgtgtgtgagtgtgtgtgtgtg 171
||||||||||||||||||||| ||| ||||| ||||||||||||||||||
Sbjct: 321 gtgtgagtgtgtgtgtgtgtg--tgtctgtgtatgtgagtgtgtgtgtgtg 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
