Query= MSMg01no493_g22.b1 MSMg01no493_g22.b1 CHROMAT_FILE:
MSMg01no493_g22.b1 PHD_FILE: MSMg01no493_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:57 2005
(648 letters)
>mm_chr10_14732360_14733407
Length = 1048
Score = 1230 bits (636), Expect = 0.0
Identities = 642/644 (99%)
Strand = Plus / Plus
Query: 5 gaattctcagtttatttcagtaccccattttttttaattggcacttattttctgagaaat 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcagtttagttcagtaccccattttttttaattggcacttattttctgagaaat 264
Query: 65 catttagaagaaaacagtaggccatgtaaatgcctcaggttatcagaaattacaaagtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catttagaagaaaacagtaggccatgtaaatgcctcaggttatcagaaattacaaagtga 324
Query: 125 aagatgaaggaagagctcagcaagtttgaaagtttgtgtgtatgaagccaagtcccggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 325 aagatgaaggaagagctcagcaagtttgaaagtttgtgtgtatgaagccaagtccgggca 384
Query: 185 tggccgatgtacattagagggtgctgtgggttcccgattgtccctgctgcttgtttggta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggccgatgtacattagagggtgctgtgggttcccgattgtccctgctgcttgtttggta 444
Query: 245 atccccaaataattattcatcaactccccaagatgtgattctcaggaaatgaagaagaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atccccaaataattattcatcaactccccaagatgtgattctcaggaaatgaagaagaca 504
Query: 305 ctcaattaaaaatattaatatgggtcaaaaaggggatttgagaaaattacaaaataattt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctcaattaaaaatattaatatgggtcaaaaaggggatttgagaaaattacaaaataattt 564
Query: 365 actctcgtatggagttagttttaattagtttgattcacaaaataccattagtttcttctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actctcgtatggagttagttttaattagtttgattcacaaaataccattagtttcttctt 624
Query: 425 cgacctcattgttcatttcttcttattggttcccatgtttatatgtctcagttatgaaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cgacctcattgttcatttcttcttattggttcccatgtttatatgtctcagttatgaaat 684
Query: 485 tcaaataattgtttcgctaaaattctttaaaggacttgtttacagaatcaggaaagggaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcaaataattgtttcgctaaaattctttaaaggacttgtttacagaatcaggaaagggaa 744
Query: 545 ctgagattttcctgtgtcattggttgtaaagctgaaaagagaatagagtaataaatatat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgagattttcctgtgtcattggttgtaaagctgaaaagagaatagagtaataaatatat 804
Query: 605 ggcagtcacactaaatctacattaaactgcaaacatctgttctc 648
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggcagtcacactaaatctacattaaactgcaaacatctgttctc 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_g22.g1 MSMg01no493_g22.g1 CHROMAT_FILE:
MSMg01no493_g22.g1 PHD_FILE: MSMg01no493_g22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:58 2005
(523 letters)
>mm_chr10_14889437_14890359
Length = 923
Score = 920 bits (476), Expect = 0.0
Identities = 497/504 (98%), Gaps = 1/504 (0%)
Strand = Plus / Minus
Query: 21 ctgagccccattgttggatgtgatccttataaggtgggagaggttcttatgcatgtgcat 80
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 923 ctgagccccattgttggatgtgatccttataaggtgggagaggttcttatgcatgtgcgt 864
Query: 81 gtctaaaatctgaatgtaaatttgatttttaaagtgctaaaacaatagagaggataaaag 140
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 gtctaaaatctgaatgtcaatttgatttttaaagtgctaaaacaatagagaggataaaag 804
Query: 141 actgtgaaaaagaagaccaagatgttgcctgcaagccatttgacagaact-gtgtgctaa 199
||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 803 actgtgaaaaagaagaccaagatgttgcctgcaaggcatttgacagaactcctgtgctaa 744
Query: 200 gatcagtactgggctgggtctcctagtttaaatcctgactggaggccaaacactgtcact 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gatcagtactgggctgggtctcctagtttaaatcctgactggaggccaaacactgtcact 684
Query: 260 ttaagtcttaggaagactttacaacctcagaagcagttcactcaaaggggatgaatgaag 319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ttaagtcttaggaagactttacaacctcagaagcagttcactcaaaggggatgaatgaag 624
Query: 320 gagtaagtgataaattagctcatatatccaagagtaagcttttccattgaattgttcttc 379
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gagtaagtgataaattagcgcatatatccaagagtaagcttttccattgaattgttcttc 564
Query: 380 cccaggaatatattgtgtacacattcctctataaaagaaagtataatgcattaaatctgt 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cccaggaatatattgtgtacacattcctctataaaagaaagtataatgcattaaatctgt 504
Query: 440 aattgtttttggtaggatgaccatttattttctgttaatcctatggatccaatgagctgg 499
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 503 aattgtttttggtaggatgaccatttatattctgttaatcctatggatccaatgagctgg 444
Query: 500 ggaaaactttccattttctgatat 523
||||||||||||||||||||||||
Sbjct: 443 ggaaaactttccattttctgatat 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space: 468369
Effective search space used: 468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
