Query= MSMg01no493_h06.b1 MSMg01no493_h06.b1 CHROMAT_FILE:
MSMg01no493_h06.b1 PHD_FILE: MSMg01no493_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:59 2005
(677 letters)
>mm_chr10_8662820_8663896
Length = 1077
Score = 1245 bits (644), Expect = 0.0
Identities = 664/674 (98%), Gaps = 7/674 (1%)
Strand = Plus / Plus
Query: 5 gaattccaagtgtggctttcagaacttccaaggagcaagggcctgtgagcctgcatggcg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaagtgtggctttcagaacttccaaggagcaagggcctgtgagcctgcatggcg 264
Query: 65 gcagggctggttggtgccctaattgtagatcattttctgtgtagcactgtggaagcctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcagggctggttggtgccctaattgtagatcattttctgtgtagcactgtggaagcctct 324
Query: 125 ggcatatcgccttagtgttattcccatgcctctacagctgcgggacttaacaagaggatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggcatatcgccttagtgttattcccatgcctctacagctgcgggacttaacaagaggatt 384
Query: 185 aactaggttagttagatcaagacacgggactgggattgtggtttagttggtacagtgtgt 244
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aactaggttatttagatcaagacacgggactgggattgtggtttagttggtacagtgtgt 444
Query: 245 gtgtgtgtgcctcatacacagatccctagatgcatcctccagcactgcatagtctgactg 304
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtg------cctcatacacagatccctagatgcatcctccagcactgcatagtctgactg 498
Query: 305 gggggtgacagaacacgcctataaccccaacactccggagtattgggagtatcagaagtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gggggtgacagaacacgcctataaccccaacactccggagtattgggagtatcagaagtt 558
Query: 365 caagctcatccacaagcacatagtcaactggaggctagcctgggctacaagagaccctgc 424
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 559 caagctcatccacaagcacatagccaactggaggctagcctgggctacaagagaccctgc 618
Query: 425 ttcaaaacatacaacaaattagattaagttgtgcgcataatcatctctgtacagcgagct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttcaaaacatacaacaaattagattaagttgtgcgcataatcatctctgtacagcgagct 678
Query: 485 gatccgcattcactgtgcctctagatcttaaagcaccttcgccagtggccttaggtaggt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gatccgcattcactgtgcctctagatcttaaagcaccttcgccagtggccttaggtaggt 738
Query: 545 cagggatggttgttccaggcctgatagccttcctttcagtccgcattgagcaatccatct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cagggatggttgttccaggcctgatagccttcctttcagtccgcattgagcaatccatct 798
Query: 605 tttgcaccctccagtacaaaccccaatgtgtttgcttccttctctaaa-taaagcctctg 663
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 799 tttgcaccctccagtacaaaccccaatgtgtttgcttccttctctaaaataaagcctcgg 858
Query: 664 tctctggggcatta 677
||||||||||||||
Sbjct: 859 tctctggggcatta 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_h06.g1 MSMg01no493_h06.g1 CHROMAT_FILE:
MSMg01no493_h06.g1 PHD_FILE: MSMg01no493_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:59 2005
(549 letters)
>mm_chr10_8808561_8809509
Length = 949
Score = 837 bits (433), Expect = 0.0
Identities = 459/469 (97%), Gaps = 4/469 (0%)
Strand = Plus / Minus
Query: 1 tgtagctcaaaattcgttgaaataaatgtttctacatgttttaaaaataaaaatatttat 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tgtagctcagaattcgttgaaataaatgtttctacatgttttaaaaataaaaatatttat 409
Query: 61 ttaataaaataaatatgtatctattcagtcacgtggcaaacatatagaatgatgaatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ttaataaaataaatatgtatctattcagtcacgtggcaaacatatagaatgatgaatgta 349
Query: 121 agcatttgagaaattcaacatccagtccctgtcttttggaaaacctggctgtgttcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 agcatttgagaaattcaacatccagtccctgtcttttggaaaacctggctgtgttcacca 289
Query: 181 tgaaacacagcgctctctctccctccctccctccctccctccctccctccctctctctct 240
||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||
Sbjct: 288 tgaaacacagcgctctctctccctccctccctccctccctctctctctctctctctctct 229
Query: 241 ctctctctcttgctcgctctctcgctttctctctcactctctctctc---cgcccctctc 297
||||||||||||||||||||||| || |||||||||||||||||||| | ||||||||
Sbjct: 228 ctctctctcttgctcgctctctcactctctctctcactctctctctctctc-cccctctc 170
Query: 298 tctctttctctatcctgttactaaggaaactgctggatctggacatacccaggtcccttg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 tctctttctctatcctgttactaaggaaactgctggatctggacatacccaggtcccttg 110
Query: 358 caaagatatttcagaagtgaaaaggcttttgagagagaaaaaaaatcaagatatctggta 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 caaagatatttcagaagtgaaaaggcttttgagagagaaaaaaaatcaagatatctggta 50
Query: 418 ctctaacttgtggttttcatgttgtctcaacttaagtatggaatataga 466
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ctctaacttgtggttttcatgttgtctcaacttaagtatggaatataga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
