Query= MSMg01no494_a16.b1 MSMg01no494_a16.b1 CHROMAT_FILE:
MSMg01no494_a16.b1 PHD_FILE: MSMg01no494_a16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:47 2005
(390 letters)
>mm_chr10_118513649_118514440
Length = 792
Score = 617 bits (319), Expect = 0.0
Identities = 370/395 (93%), Gaps = 19/395 (4%)
Strand = Plus / Plus
Query: 1 tcagtgacaaccttacaagtcagtatttcccaaactgggaaatgagaaaatgtatggatg 60
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 201 tcagtgacaaccttacaagtcagaatttcccaaactgggaaatgagaaaatgtacggatg 260
Query: 61 gcttaaaaatcattaattgttaccaatattaggaacttat--tttttttaatcatggcag 118
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 261 gcttaaaaatcattaattgttaccaatattgggaacttattatttttttaatcatggcag 320
Query: 119 gattttaaaatacataatcataaacaaggtatacctcagcgatgtatgtaactctcgaat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattttaaaatacataatcataaacaaggtatacctcagcgatgtatgtaactctcgaat 380
Query: 179 tttgggttttgttttttgtttgtttgtttgtttgtctgtttttgtttgttttttgagaca 238
||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 381 tttgggttttg--ttttgtttgtttgtttg----------tttgtttg--ttttgagaca 426
Query: 239 ggatctctctacatggctctagctgtcctgaaactcactacttagaccaggctgtcctca 298
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gggtctctctacatggctctagctgtcctgaaactcactacttagaccaggctgtcctca 486
Query: 299 aactcacataaatcccccggcctttgcttctgcctcccaagggatgaaaggtatgtgcct 358
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 487 aactcacataaatcccccggcctttgcttctgcctcccaagggatgaaaggtgtgtgcct 546
Query: 359 c-atatctggctgca-tgcatata-ctctgaatgc 390
| ||||||||||||| |||||||| ||||| ||||
Sbjct: 547 ccatatctggctgcaatgcatataactctggatgc 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 390
Length of database: 792
Length adjustment: 9
Effective length of query: 381
Effective length of database: 783
Effective search space: 298323
Effective search space used: 298323
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_a16.g1 MSMg01no494_a16.g1 CHROMAT_FILE:
MSMg01no494_a16.g1 PHD_FILE: MSMg01no494_a16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:47 2005
(239 letters)
>mm_chr10_118683282_118683920
Length = 639
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 1 cactattggtgaatgatccataacaggaagcacttgtgtctatttgagtgtgaagctgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cactattggtgaatgatccataacaggaagcacttgtgtctatttgagtgtgaagctgtc 380
Query: 61 tgctcccgaacacaaatcaaaattgcccttttcttcctctcttaacccatctgctttggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgctcccgaacacaaatcaaaattgcccttttcttcctctcttaacccatctgctttggc 320
Query: 121 aatcagagagacatcctcttatctaggaaattaataactactttaataaatagagctctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aatcagagagacatcctcttatctaggaaattaataactactttaataaatagagctctc 260
Query: 181 ttttctttaactcaattcacaacaaatgtaggaaatcatgacaaccaaatttacttggt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttttctttaactcaattcacaacaaatgtaggaaatcatgacaaccaaatttacttggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
