Query= MSMg01no494_a18.b1 MSMg01no494_a18.b1 CHROMAT_FILE:
MSMg01no494_a18.b1 PHD_FILE: MSMg01no494_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:47 2005
(330 letters)
>mm_chr10_82959411_82960140
Length = 730
Score = 603 bits (312), Expect = e-177
Identities = 329/342 (96%), Gaps = 12/342 (3%)
Strand = Plus / Plus
Query: 1 ctgacctggcctctaaccccaggatggaatgttctggtaagaagtgctgattccattcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 ctgacctggcctctaaccccaggatggaatgttctggtaagaagtgctgattccattcct 248
Query: 61 cactggcagatccacacttgcttcttatca------------actctgtctacattttct 108
|||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 249 cactggcagatccacacttgcttcttatcatctttgtcttcaactctgtctacattttct 308
Query: 109 gactgttactccagtccagtgagaaaaataggagccactatgaccctataaattcaaaca 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gactgttactccagtccagtgagaaaaataggagccactatgaccctataaattcaaaca 368
Query: 169 taggtctgcttctgatctcttagtgtcttgcacggagccctgcgccagagagatgctctg 228
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 369 taggtctgcttctgatctcttagtgtcttgcacagagccctgcgccagagagatgctctg 428
Query: 229 tgagagagggaccatatctgcctgcctggttctgtatcacctacactcagcacagtgtct 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgagagagggaccatatctgcctgcctggttctgtatcacctacactcagcacagtgtct 488
Query: 289 ggcattgctaggtgctcaataaatagctgttgaggggctggt 330
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ggcattgctaggtgctcaataaatagctgttgaggggctggt 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_a18.g1 MSMg01no494_a18.g1 CHROMAT_FILE:
MSMg01no494_a18.g1 PHD_FILE: MSMg01no494_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:48 2005
(256 letters)
>mm_chr10_83149898_83150553
Length = 656
Score = 495 bits (256), Expect = e-144
Identities = 256/256 (100%)
Strand = Plus / Minus
Query: 1 atattgaatagctctcttctttctttctttttttttttaaagacaaacacaagaaaccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 atattgaatagctctcttctttctttctttttttttttaaagacaaacacaagaaaccaa 397
Query: 61 ctttatagtcctctatatacaggataaagacataaggcactttccatatgattgaaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ctttatagtcctctatatacaggataaagacataaggcactttccatatgattgaaatta 337
Query: 121 tttacaaacactatcatacaaaagaacatgcaaattgggagtagttccccaaatgagcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tttacaaacactatcatacaaaagaacatgcaaattgggagtagttccccaaatgagcac 277
Query: 181 actatccagacattttgatagggttaaatacctgagagaagagcattgagggacaatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 actatccagacattttgatagggttaaatacctgagagaagagcattgagggacaatttg 217
Query: 241 ttttggtttatagcgg 256
||||||||||||||||
Sbjct: 216 ttttggtttatagcgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 656
Length adjustment: 9
Effective length of query: 247
Effective length of database: 647
Effective search space: 159809
Effective search space used: 159809
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
