Query= MSMg01no494_d06.b1 MSMg01no494_d06.b1 CHROMAT_FILE:
MSMg01no494_d06.b1 PHD_FILE: MSMg01no494_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:59 2005
(613 letters)
>mm_chr10_37447320_37448332
Length = 1013
Score = 967 bits (500), Expect = 0.0
Identities = 566/588 (96%), Gaps = 2/588 (0%)
Strand = Plus / Plus
Query: 27 ggatgaaaccaatggtgctacaaattctacttttagtgaaatttactgccagtctttcta 86
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 227 ggatgaaaccaatggtgctgcaaattctacttttagtgaaacttactgccagtctttcta 286
Query: 87 aatgagtaaaacagattcatggaaagcccactatgttgtaggaagcatcttgtcagaatt 146
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aatgagtaaaacagatacatggaaagcccactatgttgtaggaagcatcttgtcagaatt 346
Query: 147 tatactattttatgtcctgtatgaacatagaaatcaatattctgcagaaagccttccatg 206
|||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 347 tatattattttttgtcctgtatgaacatagaaatcaatattctgcagaaagccttcaata 406
Query: 207 tgtgtgtatgtcttccaaagatgctactaaattatttgcaaagattg-tttcgtaccact 265
||||||||| ||||||||| |||||||| |||||||||||||||||| ||| ||||||||
Sbjct: 407 tgtgtgtatatcttccaaatatgctactcaattatttgcaaagattgcttt-gtaccact 465
Query: 266 cagatgttctttaacaaagcagtgggcttcttgatccattactgaaagcacacattacag 325
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 466 cagatgttctttaacaaagcagtggacttcttggtccattactgaaagcacacattacag 525
Query: 326 tgtccggctcaagctcttataggagcaagaaaaagcatattatggtaacttgcctgtaag 385
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 526 tgtctggctcaagctcttataggagcaagaaaaagtatattatggtaacttgcctgtaag 585
Query: 386 ttgtccactgcttcacttatgtcctggtactcacatctttgcatactcccctgtagtgtt 445
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 586 ttgtccactgcttcacttatgtcctggtactcacatctttgcatactcccatgtagtgtt 645
Query: 446 aagagcagctgacatatatagcactatggctatttccaaaatgaaaaaatatgactgaag 505
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aagagcagctgacatatatagcactatggctatttccaaaatgaaaaaatatgactgaaa 705
Query: 506 acttccatgctaggttgtgaaacacacgtggtttttacctttctctaccccatattgctt 565
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 706 atttccatgctaggttgtgaaacacatgtggtttttacctttctctaccccatattgctt 765
Query: 566 actataggcaaacatactgcagcatgaggatataaagcgctttggaga 613
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 766 cctataggcaaacatactgcagcatgaggatataaagagctttggaga 813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space: 604809
Effective search space used: 604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_d06.g1 MSMg01no494_d06.g1 CHROMAT_FILE:
MSMg01no494_d06.g1 PHD_FILE: MSMg01no494_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:59 2005
(672 letters)
>mm_chr10_37586218_37587289
Length = 1072
Score = 1268 bits (656), Expect = 0.0
Identities = 668/672 (99%)
Strand = Plus / Minus
Query: 1 aacagctatggatagtgtacagacaacttaaacttctctggttcttaactctcttgtgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 aacagctatggatagtgtacagacaacttaaacttctctggttcttaactctcttgtgta 813
Query: 61 taaaacagaatatctactgaaaggtgaaccttaggcacaggagagctaaacaaaattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 taaaacagaatatctactgaaaggtgaaccttaggcacaggagagctaaacaaaattttc 753
Query: 121 aattactttaaaactatctacatttaaacaactgttattttattgaaatgtattaataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aattactttaaaactatctacatttaaacaactgttattttattgaaatgtattaataca 693
Query: 181 tagtaaataataggaggtgttacttgtagcaactctgtaattaacatgcagacatgacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 692 tagtaaataataggaggtgttacttgtagcaactctgtaattaacatgcaggcatgacat 633
Query: 241 caaaatcctttccaatgtttcagggatatgtttgcaaattaatgatttgtatttttgcct 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 caaaatcctttccagtgtttcagggatatgtttgcaaattaatgatttgtatttttgcct 573
Query: 301 caatttgacagattttcttttttacatctggaatatttgaaccataaccaaaattccaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 caatttgacagattttcttttttacatctggaatatttgaaccataaccaaaattccaca 513
Query: 361 ccaatgttgtaatttgatttcatatatttctgtaacatagaaaatgccattatgtcttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ccaatgttgtaatttgatttcatatatttctgtaacatagaaaatgccattatgtcttaa 453
Query: 421 tataatgggagatttcaatttatcaataattatgtcttaatttgcattcgaaatgtttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tataatgggagatttcaatttatcaataattatgtcttaatttgcattcgaaatgtttaa 393
Query: 481 ttttcaccttaaaagagcctgttttcatagaatttatctggtaatagtcttcataattat 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctttcaccttaaaagagcctgttttcatagaatttatctggtaatagtcttcataattat 333
Query: 541 ttaaaagttttatctcttaattatgcagaattcactatgccagcaacttttctaacctat 600
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ttaaaagttttatcttttaattatgcagaattcactatgccagcaacttttctaacctat 273
Query: 601 ctataaataatatatatgtattactaacataaaaatatacaattatgacttagatacaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctataaataatatatatgtattactaacataaaaatatacaattatgacttagatacaga 213
Query: 661 ctctaaagggtg 672
||||||||||||
Sbjct: 212 ctctaaagggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
