Query= MSMg01no494_i16.b1 MSMg01no494_i16.b1 CHROMAT_FILE:
MSMg01no494_i16.b1 PHD_FILE: MSMg01no494_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:24 2005
(601 letters)
>mm_chr10_95773395_95774390
Length = 996
Score = 1087 bits (562), Expect = 0.0
Identities = 587/598 (98%), Gaps = 5/598 (0%)
Strand = Plus / Plus
Query: 4 ggaattctttgttgcttacagcattcacgtcttcttcctgctgtttgcaaatgagtacgg 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctttgttgcttacagcattcatgtcttcttcctgctgtttgcaaatgagtacgg 263
Query: 64 tttaactcatttatttgtacccagtagattaaattctactacagaggggtctggaacaca 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 264 tttaactcatttatttgtacccagtagattaaattccactacagaggggtctggaacaca 323
Query: 124 gaaggaaaaaaaaaaaaaagaaaaagaaatcaagttactactactaataagaacaacaac 183
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 g-----aaaaaagaaaaaagaaaaagaaatcaagttactactactaataagaacaacaac 378
Query: 184 agcccaaagcagttgcagatgaatggcttagatccagaagcattctgttggtctgtttgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agcccaaagcagttgcagatgaatggcttagatccagaagcattctgttggtctgtttgt 438
Query: 244 atatgcacagactagctgggcatctctcatctcggttcattttctactcaaacgttggat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 atatgcacagactagctgggcatctctcatctcggttcattttctactcaaacgttggat 498
Query: 304 cagccaggatctgaaatgaacgtccttggttatctctggatgcagaggacagaatgcaac 363
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 499 cagccaggatctgaaatgaacatccttggttatctctggatgcagaggacagaatgtaat 558
Query: 364 ggattgctttggctaggtcaagcaaattcttgcttgtgaatcaccttggcctcaggttca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggattgctttggctaggtcaagcaaattcttgcttgtgaatcaccttggcctcaggttca 618
Query: 424 ggtagagatggcatggtcgcatggaagagtggctacagttttgtgctagtagtcggccct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggtagagatggcatggtcgcatggaagagtggctacagttttgtgctagtagtcggccct 678
Query: 484 tctttgccctttctttctccaaaccggctgcagccagcattggttggcctctgcctgttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tctttgccctttctttctccaaaccggctgcagccagcattggttggcctctgcctgttt 738
Query: 544 gaaagagatttgatttatggactggctccaagactaaatgtgtatttatcttccagag 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaaagagatttgatttatggactggctccaagactaaatgtgtatttatcttccagag 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 996
Length adjustment: 10
Effective length of query: 591
Effective length of database: 986
Effective search space: 582726
Effective search space used: 582726
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_i16.g1 MSMg01no494_i16.g1 CHROMAT_FILE:
MSMg01no494_i16.g1 PHD_FILE: MSMg01no494_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:24 2005
(423 letters)
>mm_chr10_95914879_95915705
Length = 827
Score = 737 bits (381), Expect = 0.0
Identities = 414/427 (96%), Gaps = 4/427 (0%)
Strand = Plus / Minus
Query: 1 taggacactttgctttcatcatgctccaatcaacaaggccaagatgcaagccaatgacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 taggacactttgctttcatcatgctccaatcaacaaggccaagatgcaagccaatgacaa 568
Query: 61 tataaattgggctttcagtctctggctactt----aaagatctccaatagataacaaggg 116
||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 567 tataaattgggctttcagtctctggctacttactcaaagatttccaatagataacaaggg 508
Query: 117 gagaaaacaaacactgattgaatacctactaggtagtaggtatctgtctatacatttcac 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gagaaaacaaacactgattgaatacctactaggtagtaggtatctgtctatacatttcac 448
Query: 177 cttaatcttaaaaaatccccttgtgcatctggcaaaagaagcgggaaagagtcttggtgc 236
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 447 cttaatcttaaaaaatccccttgtgcatctggcaaaagaagtgggaaagagtctaggtgc 388
Query: 237 ttctgatatagaaggaagctagtgaaagtagatcaccgaatgccggacaacaacaaccac 296
|||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||
Sbjct: 387 ttctgatatagaaggaagctagtgaaagtagaccacccaacaccggacaacaacaaccac 328
Query: 297 aagccacttgtacctgggagatggacagtttgtcttctccgccaaccttcaagcttcaca 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aagccacttgtacctgggagatggacagtttgtcttctccgccaaccttcaagcttcaca 268
Query: 357 ctcataacattgcacagcatctgtcattagcgtctgagattctgagctgaatctcatact 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 267 ctcataacattgcacagcatctgtcattagcgtctgagattctgagctgaatctcagact 208
Query: 417 cgggctg 423
|| ||||
Sbjct: 207 cgagctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 827
Length adjustment: 9
Effective length of query: 414
Effective length of database: 818
Effective search space: 338652
Effective search space used: 338652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
