Query= MSMg01no495_b18.b1 MSMg01no495_b18.b1 CHROMAT_FILE:
MSMg01no495_b18.b1 PHD_FILE: MSMg01no495_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:07 2005
(658 letters)
>mm_chr10_64522703_64523753
Length = 1051
Score = 1174 bits (607), Expect = 0.0
Identities = 645/675 (95%), Gaps = 28/675 (4%)
Strand = Plus / Plus
Query: 5 gaattcctcagcttctagagctaagtggggcagagaagaatgaaactagataccttctct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcagcttctagagctaagtggggcagagaagaatgaaactagataccttctct 264
Query: 65 tataatgctctagttattcaatagcagaaacaagtttaaacaccccaaatgagaaatgaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tataatgctctagttattcaatagcagaaacaagtttaaacaccccaaatgagaaatgaa 324
Query: 125 tcaaagattcaagctagagaattaaaagtgtttgttgtttttttttttttgtgtgtgtgt 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 325 tcaaagattcaagctagagaattaaaagtgtttgttgtttttttttt-------gtgtgt 377
Query: 185 gtgtgttgaaaagaaaaaagaagtttcttatataacattataaaaaaatatttctatcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtgtgttgaaaagaaaaaagaagtttcttatataacattataaaaaaatatttctatcta 437
Query: 245 ca---------------------taggtaccatacacttttaattctagctacttatggt 283
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 438 caatatctatttttagcaagacataggtaccatacacttttaattctagctacttatggt 497
Query: 284 aagacaggcagggcacaagctcaatgcaaatctgggctacccagtgaatctaaaatcacc 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aagacaggcagggcacaagctcaatgcaaatctgggctacccagtgaatctaaaatcacc 557
Query: 344 ttgggaaatttaatgagatcctgtctacaaatagaagcataaggagggccaggaacataa 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttgggaaatttaatgagatcctgtctacaaatagaagcataaggagggccaggaacataa 617
Query: 404 gtaactggtagtgctcttgactagcatgactcaaggtgaagcactggattgttgatagca 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gtaactggtagtgctcttgactagcatgactcaaggtgaagcactggattgttgatagca 677
Query: 464 taacacacacacacacacacacacacaaacactcacacatactcacatacacttaaacat 523
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 678 taacacacacacacacacacacacataaacactcacacacactcacatacacttaaacat 737
Query: 524 gtgtgcatacccacacacatgatctctacgtttgacaatatatttaaagtttatttttat 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gtgtgcatacccacacacatgatctctacgtttgacaatatatttaaagtttatttttat 797
Query: 584 aaatatttgctgaatggtaatttgattctcatctattccagctgcagctcttgggaattt 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aaatatttgctgaatggtaatttgattctcatctattccagctgcagctcttgggaattt 857
Query: 644 cattttaaaatttca 658
|||||||||||||||
Sbjct: 858 cattttaaaatttca 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1051
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1041
Effective search space: 674568
Effective search space used: 674568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_b18.g1 MSMg01no495_b18.g1 CHROMAT_FILE:
MSMg01no495_b18.g1 PHD_FILE: MSMg01no495_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:07 2005
(649 letters)
>mm_chr10_64652509_64653557
Length = 1049
Score = 1203 bits (622), Expect = 0.0
Identities = 640/646 (99%)
Strand = Plus / Minus
Query: 1 ttatagccaagatgggtggcatagagattccaagaagagaagatgaaaaaaataaagtct 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 ttatagccaaggtgggtggcatagagattccaagaagagaagatgaaaaaaataaagtct 915
Query: 61 ctacagtgaaggactctcagagagtaaaagcagctttgaatatggacagtttcttgagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 ctacagtgaaggactctcagagagtaaaagcagctttgaatatggacagtttcttgagca 855
Query: 121 tcttgttgcagagtccaagcagactggagagagatttttgtgttgtttaagcaattatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tcttgttgcagagtccaagcagactggagagagatttttgtgttgtttaagcaattatgt 795
Query: 181 aacctcacatgtcaatgtgcatggtaccctgtggtttaaaatttggaataatgttctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 aacctcacatgtcaatgtgcatggtaccctgtggtttaaaatttggaataatgttctcca 735
Query: 241 agaatgtaaatcaaagactcctgagggtctgcagaaattgaccattgacaagagcagaaa 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 734 agaatgtaaatcaaagactcctgagggtctgcagaaagtgaccattgacaagagcagaaa 675
Query: 301 gagggacagtagcaactccccacagtaacctgcccctccaacaacatcagagttgttcca 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 674 gagggacagtagcagctccccacagtaacctgcccctccaacaacatcagagttgctcca 615
Query: 361 ctactctcttgtgggagatcctacactcctcccagagtcaccacaaatatctgaacctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ctactctcttgtgggagatcctacactcctcccagagtcaccacaaatatctgaacctta 555
Query: 421 attagcatgcttccaatcactactaaaagacatcagtgctgaagaagtgatagaacacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 attagcatgcttccaatcactactaaaagacatcagtgctgaagaagtgatagaacacta 495
Query: 481 aaatggacctttgccaaatagaggttatgaagaacacaagtgactattgactcagatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aaatggacctttgccaaatagaggttatgaagaacacaagtgactattgactcagatgtg 435
Query: 541 cagggaaagtacctggtcttattaccctagtagggaactcctgaactagcatcgtgcaaa 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 434 cagggaaagtacctggtcttattaccctagtaggggactcctgaactagcatcgtgcaaa 375
Query: 601 ctggggagtttagtaaattaacatcattcattatgagtatgactaa 646
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ctggagagtttagtaaattaacatcattcattatgagtatgactaa 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
