Query= MSMg01no497_i24.b1 MSMg01no497_i24.b1 CHROMAT_FILE:
MSMg01no497_i24.b1 PHD_FILE: MSMg01no497_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:18 2005
(652 letters)
>mm_chr10_127615792_127616843
Length = 1052
Score = 1089 bits (563), Expect = 0.0
Identities = 631/665 (94%), Gaps = 24/665 (3%)
Strand = Plus / Plus
Query: 7 ggaattcagcatgctaaccacgcgctctcccaagcactaagccaagccttcagcccatgt 66
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 197 ggaattcagcatgctaagcacgcactctcccaagcactaagccaagccttcagcccatgt 256
Query: 67 gagagctatcttacttaactttatgattaatttaattacttgttgatgtaagatagggtc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gagagctatcttacttaactttatgattaatttaattacttgttgatgtaagatagggtc 316
Query: 127 tcactctgtagtgctcactgacctcaaaactctgcatctccctgtctccttagtgcgcta 186
|||||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||
Sbjct: 317 tcactctgtagtgctcactgacttcaaa-ctccgcatctccctgtctccttagtgtgcta 375
Query: 187 ttactgggcatacatgaacgatcgccccc-----------gttttgtttggttggtttag 235
||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 376 ttactggacatacatgaacgatcgccccccccccccccccgttttgtttggttggtttag 435
Query: 236 gtttggctatgttgtttgagtgtgctagaggatcaagcagtctgccaaagagacacagtc 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gtttggctatgttgtttgagtgtgctagaggatcaagcagtctgccaaagagacacagtc 495
Query: 296 ccacacttccagcatatacttcatcctcttttttaacagttaatgtgtttaatcgtttat 355
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 496 ccacacttccagcatatacttcatcctcttttttaacagttaatgtgtttaaccgtttat 555
Query: 356 gagtattgtgtgccacatgtgttcctggtggtaagagctaactacttcacatgtctgaaa 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gagtattgtgtgccacatgtgttcctggtggtaagagctaactacttcacatgtctgaaa 615
Query: 416 ccttttttaaaaaattatatttatttatttggtttttc-aagacagggtttctctgtgta 474
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 616 ccttttttaaaaaattatatttatttatttggtttttccaagacagggtttctctgtgta 675
Query: 475 ggaacacgggtaagaagtctgaagtgggcatcagactccctaaaactggagtcacagacg 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 676 ggaacacgggtaagaagtctgaagtgggcatcagactccctaaaactggagtcacagatg 735
Query: 535 ctggtgagctaccgtgtgggtgctaagaataaagtctgggtcctctgtgatagctct-aa 593
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 736 ctggtgagctaccgtgtgggtgctaagaataaagtctgggtcctc----atagctcttaa 791
Query: 594 ccactaaatcaactctccagtcttgtttggg--gttttgtttttt----caaacagggtc 647
|||||||||||||||||||||||||||||| ||||| |||||| |||||||||||
Sbjct: 792 ccactaaatcaactctccagtcttgtttggtacgtttttttttttttttcaaacagggtc 851
Query: 648 tcatg 652
|||||
Sbjct: 852 tcatg 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_i24.g1 MSMg01no497_i24.g1 CHROMAT_FILE:
MSMg01no497_i24.g1 PHD_FILE: MSMg01no497_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:18 2005
(329 letters)
>mm_chr10_127747164_127747892
Length = 729
Score = 627 bits (324), Expect = 0.0
Identities = 327/328 (99%)
Strand = Plus / Minus
Query: 2 ttcaggattagaaaaagcatttaaggtagacaaaaaataactatagccatggaatgatag 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttcaggattagaaaaagcatttaaggtagacaaaaaataactatagccatggaatgatag 470
Query: 62 ccaggctagcaaaggcttccatctctccccccacgacccctccacccagcagtgaggtac 121
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 469 ccaggctagcaaaggcttccatctctccccccacgagccctccacccagcagtgaggtac 410
Query: 122 aacctgggagcgggagcagagttggcagcaggccagtcagagagcagtgcatcagtggta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aacctgggagcgggagcagagttggcagcaggccagtcagagagcagtgcatcagtggta 350
Query: 182 agtgggacgggaatgagggaaagcggcagcagatcctggctccagtccagaggcggcaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agtgggacgggaatgagggaaagcggcagcagatcctggctccagtccagaggcggcaag 290
Query: 242 gagtccacaagacagggcagggcaaactcagtctctcgggagtaggggttgaaggacggc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gagtccacaagacagggcagggcaaactcagtctctcgggagtaggggttgaaggacggc 230
Query: 302 tcaggggaatcagtccagagatgcacgc 329
||||||||||||||||||||||||||||
Sbjct: 229 tcaggggaatcagtccagagatgcacgc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
