Query= MSMg01no498_b15.b1 MSMg01no498_b15.b1 CHROMAT_FILE:
MSMg01no498_b15.b1 PHD_FILE: MSMg01no498_b15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:00 2005
(549 letters)
>mm_chr10_48935763_48936710
Length = 948
Score = 870 bits (450), Expect = 0.0
Identities = 462/466 (99%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 3 ttttttttaaaaggagaaaatgtcaaagtctaactagcaaagatgatattcaatatcctg 62
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tttttttt-aaaggagaaaatgtcaaagtctaactagcaaagatgatattcaatatcctg 407
Query: 63 aaaaaaagcctcatgattttctctataattatttattatttcattgttttctcctgtttc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 aaaaaaagcctcatgattttctctataattatttattatttcattgttttctcctgtttc 347
Query: 123 agtgttaaacattgctagcctcaatatatctattcaaagtcttctatattttactgaaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agtgttaaacattgctagcctcaatatatctattcaaagtcttctatattttactgaaaa 287
Query: 183 ctggtaataatagattaattagaaatatactccaaatatatattgtcattcacctagaat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ctggtaataatagattaattagaaatatactccaaatatatattgtcattcacctagaat 227
Query: 243 tttaaaaccactgctataagtttctgtaggtttatggggtcccctgttcactccaccaca 302
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 226 tttaaaaccactgctataagtttctgtagggttatggggtcccctgttcactccaccaca 167
Query: 303 ggactgagtgggtcagagaagcaggacacaggagttttgactacacttaccccaaggtgt 362
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 166 ggactgagtgggtcagagaagcaggacacaggagttttgactgcacttaccccaaggtgt 107
Query: 363 tgccaggtgggccttgggcctaggggtccctgggacactactctggggttggggaagtac 422
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tgccaggtgggccttggacctaggggtccctgggacactactctggggttggggaagtac 47
Query: 423 attctgaagctacagatagctagatctggttctggttctcaggttc 468
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 attctgaagctacagatagctagatctggttctggttctcaggttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 948
Length adjustment: 10
Effective length of query: 539
Effective length of database: 938
Effective search space: 505582
Effective search space used: 505582
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_b15.g1 MSMg01no498_b15.g1 CHROMAT_FILE:
MSMg01no498_b15.g1 PHD_FILE: MSMg01no498_b15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:00 2005
(609 letters)
>mm_chr10_48795120_48796127
Length = 1008
Score = 1071 bits (554), Expect = 0.0
Identities = 606/646 (93%), Gaps = 38/646 (5%)
Strand = Plus / Plus
Query: 1 tgatggtaaaggtcagatatacctccgaattgacgatgcccctagacagcaggaagtagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 tgatggtaaaggtcagatatacctccgaattgacgatgcccctagacagcaggaagtagt 223
Query: 61 ttgagagacacgacgcccctgttccctcttcaccatcggcttccccctcccatttccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ttgagagacacgacgcccctgttccctcttcaccatcggcttccccctcccatttccttc 283
Query: 121 ccttatttttataataaaaagaagggggttatgttagtacaagggcattccaaacccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ccttatttttataataaaaagaagggggttatgttagtacaagggcattccaaacccagg 343
Query: 181 cactaacaatgtgacccatgacctacgttgccaaggcaacaaccaccatatcctagaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cactaacaatgtgacccatgacctacgttgccaaggcaacaaccaccatatcctagaacc 403
Query: 241 cacttggctcacctcctaccctgacttgtatgacatcattttccacataaataaggaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 cacttggctcacctcctaccctgacttgtatgacatcattttccacataaataaggaaaa 463
Query: 301 cacctttctctcaatctctctctctctc-c-------ctctctctctctctctctctctt 352
|||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 464 cacctttctctcaatctctctctctctctctctctctctctctctctctctctctctctt 523
Query: 353 tct-----------------------------tctctttcttctctttcttctctccccc 383
||| ||||||||||||||||||||||||||||
Sbjct: 524 tctctctcttcctctctctctctctctctctctctctttcttctctttcttctctccccc 583
Query: 384 tctactcgccttgacgccccgcttgtctctccccacagcaaacctctctcatgtggaact 443
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 584 tctactcgccttgacgccccgtttgtctctccccacaacaaacctctctcatgtggaact 643
Query: 444 gccttggcctggtgtgctgtttgatatatctgctaaatatatatattattagtaaacctt 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gccttggcctggtgtgctgtttgatatatctgctaaatatatatattattagtaaacctt 703
Query: 504 taaaaatataaattctgtagtatatacaaacacggctgacagttgagaacttattattag 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 taaaaatataaattctgtagtatatacaaacacggctgacagttgagaacttattattag 763
Query: 564 gtaaaatatcctcaacacaaaaagataggtgccggggttggagaga 609
|||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 764 gtaaaatatcctcaacacaaaaagataggtgc-ggggttggagaga 808
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1008
Length adjustment: 10
Effective length of query: 599
Effective length of database: 998
Effective search space: 597802
Effective search space used: 597802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
