Query= MSMg01no498_i15.b1 MSMg01no498_i15.b1 CHROMAT_FILE:
MSMg01no498_i15.b1 PHD_FILE: MSMg01no498_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:37 2005
(563 letters)
>mm_chr10_62792460_62793422
Length = 963
Score = 1021 bits (528), Expect = 0.0
Identities = 552/560 (98%)
Strand = Plus / Plus
Query: 4 ggaattctagtccttatcatcccctaaagaggaacaaaatgatgcttgcccatacaccta 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagtccttataatcccctaaagaggaacaaaatgatgcttgcccatacaccta 263
Query: 64 cataagcaataaataactaaatgtaattttaagaacatgtggaactttcaattttagata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cataagcaataaataactaaatgtaattttaagaacatgtggaactttcaattttagata 323
Query: 124 tgtatctgcacttgacaatcctggtaaaatactgggggaaaaaaaaaaaaagactagtta 183
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 324 tgtatctgcacttgacaatcccggtaaaatactgggggggaaaaaaaaaaagactagtta 383
Query: 184 tgacaatgcagtttccccaactcacaacatagaatttataagaaaagttgtgggaatact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgacaatgcagtttccccaactcacaacatagaatttataagaaaagttgtgggaatact 443
Query: 244 aacatataatcactaaccagctatgcttgtataagatgagagtaacttttacttgctggc 303
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 aacatataatcactaaccagctatgcttgtataagatgaaagtaacttttacttgctggc 503
Query: 304 cttcctaaatctgtgtctacttatagtagacaccatgatacaccagggtcctgcatccat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttcctaaatctgtgtctacttatagtagacaccatgatacaccagggtcctgcatccat 563
Query: 364 taaaaaaatctttgactggtattctttaaacagtgtagcagcacagcttccaatagtaca 423
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 taaaacaatctttgactggtattctttaaacagtgtagcagcacagcttccaatagtaca 623
Query: 424 ccttagctgcaaagtctggccatcctctaatcccagcaccaggatactgagacaagaatt 483
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 624 ccttagctgcaaagtctggccatcctctaatcccagcaccaggatacggagacaagaact 683
Query: 484 aaagcacccttacagttctgagactgtactgaaggaagacagcctttctaatccacctta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaagcacccttacagttctgagactgtactgaaggaagacagcctttctaatccacctta 743
Query: 544 gggcttacaagatgggaggt 563
||||||||||||||||||||
Sbjct: 744 gggcttacaagatgggaggt 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_i15.g1 MSMg01no498_i15.g1 CHROMAT_FILE:
MSMg01no498_i15.g1 PHD_FILE: MSMg01no498_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:37 2005
(617 letters)
>mm_chr10_62959946_62960965
Length = 1020
Score = 1137 bits (588), Expect = 0.0
Identities = 611/620 (98%), Gaps = 3/620 (0%)
Strand = Plus / Minus
Query: 1 acaatgggcttccaaagctacagtgaacactagaaactggaagagaatt---aaaaaaaa 57
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 820 acaatgggcttccaaagctacagtgaacactagaaactggaagagaattaaaaaaaaaaa 761
Query: 58 atgagaagaagaaaaattgtgtacaacattgtagaatgtttttagccaacagataaaata 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 atgagaagaagaaaaattgtgtacaacattgtagaatgtttttagccaacagataaaata 701
Query: 118 taaacctaattaaatcaaggttatcttctttatgctgtctctatccatgcatttaattca 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 taaacctaattaaatcaaggttatcttctttatgctgtctctatccatgcatttaattca 641
Query: 178 cattaggtaatgctattcagaagtttacttttccatgacagaattataaaataataaact 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 cattaggtaatgctattcagaagtttacttttccatgacagaattataaaataataaact 581
Query: 238 aagtccttgaatattcttggctatacacaattgtttttctggaaataaatgctatttgtt 297
||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 580 aagtccttgaagaaccttggctatacacaattgttattctggaaataaatgctatttgtt 521
Query: 298 atagaaaagtctttctgatctttagtatctgtcccgttcagtaaccctgaactgactgga 357
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 520 atagaaaagtctttctgatctttggtatctgtcccgttcagtaaccctgaactgactgga 461
Query: 358 aatcgggtcagtacgtggtaggagacagcagacgtttgcaaatgaagctgaggaaaggtc 417
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 460 aatcgggtcagtacgtggtaggaggcagcagacgtttgcaaatgaagctgaggaaaggtc 401
Query: 418 aaagcctgtcggattgtgcctagcctctacagcaacatgacaacgtgagtccagagccaa 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aaagcctgtcggattgtgcctagcctctacagcaacatgacaacgtgagtccagagccaa 341
Query: 478 gagcctatgacactgtagatgtcacactgtaaagcattagttttattggctataaaatat 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gagcctatgacactgtagatgtcacactgtaaagcattagttttattggctataaaatat 281
Query: 538 taagagttagggaggaacaaactacaaacactcaaacaaatctcccacagacatccatca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 taagagttagggaggaacaaactacaaacactcaaacaaatctcccacagacatccatca 221
Query: 598 ctccagcactatcccagact 617
||||||||||||||||||||
Sbjct: 220 ctccagcactatcccagact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1020
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1010
Effective search space: 613070
Effective search space used: 613070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
