Query= MSMg01no499_p07.b1 MSMg01no499_p07.b1 CHROMAT_FILE:
MSMg01no499_p07.b1 PHD_FILE: MSMg01no499_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:29 2005
(235 letters)
>mm_chr10_18065871_18066505
Length = 635
Score = 422 bits (218), Expect = e-122
Identities = 230/234 (98%)
Strand = Plus / Plus
Query: 1 gccagacttggttttctaagttacaactgaatagaaaattttcttgcttagtagcatctt 60
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 gccagacttggtattctaagttacaactgaatagaaaattttcttgtttagtagcatctt 260
Query: 61 agactgatgagatagtttgaaaacccagagttttggtgtagactaaaaagcagttctcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agactgatgagatagtttgaaaacccagagttttggtgtagactaaaaagcagttctcag 320
Query: 121 tgacacgactttgctatttcatgctttaaacagtgtcaaagttgctctgttagttttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgacacgactttgctatttcatgctttaaacagtgtcaaagttgctctgttagttttatt 380
Query: 181 tttccttgggttgaatatgtagctcatttggtagagtgcttgccgggcacagaa 234
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tttccttgggctgaatatgtagctcatttggtagagtgcttgcctggcacagaa 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 635
Length adjustment: 9
Effective length of query: 226
Effective length of database: 626
Effective search space: 141476
Effective search space used: 141476
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no499_p07.g1 MSMg01no499_p07.g1 CHROMAT_FILE:
MSMg01no499_p07.g1 PHD_FILE: MSMg01no499_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:29 2005
(276 letters)
>mm_chr10_18111001_18111676
Length = 676
Score = 468 bits (242), Expect = e-136
Identities = 268/278 (96%), Gaps = 4/278 (1%)
Strand = Plus / Minus
Query: 1 ctatgagtaccggatctccaaggagtaaaggcactggtagttaacaccaccctgttaatg 60
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 476 ctattagtaccggatctccaaggagtaaaggcactggtagttaataccaccctgttaatg 417
Query: 61 gctcaaggtgaatggataaagagaccgaagcacggaagccttcagataccatttaattga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 416 gctcaaggtgaatggataaagagaccgaagcacggaagccttcagataccatttaactga 357
Query: 121 ccgtgaccctgagaccaagaagtaatatttaaacatttagtcttatatccagatagcatt 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ccgtgaccctgaaaccaagaagtaatatttaaacatttagtcttatatccagatagcatt 297
Query: 181 tggaggcataattattatcatgagaaattaaaacaaattagtatataacctttaataaaa 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 296 tggaggcatgattattatcatgagaaattaaaacaaattagtatataacctttaagaaaa 237
Query: 241 cagtaaagccaggcagtggtg--gcacatgcctttgat 276
||||||||||||||||||||| |||| |||||||||
Sbjct: 236 cagtaaagccaggcagtggtgacgcac--gcctttgat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
