Query= MSMg01no501_f19.b1 MSMg01no501_f19.b1 CHROMAT_FILE:
MSMg01no501_f19.b1 PHD_FILE: MSMg01no501_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:11 2005
(645 letters)
>mm_chr10_9184343_9185387
Length = 1045
Score = 1203 bits (622), Expect = 0.0
Identities = 639/645 (99%)
Strand = Plus / Plus
Query: 1 ctcacattttgttcatattttgacttgtaaaaagtcaccattttgctgaagaaaaataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcacattttgttcatattttgacttgtaaaaagtcaccattttgctgaagaaaaataat 260
Query: 61 gtcccctcaatacattccaatcaacactgagcaggtaaaacccattttctatatattcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcccctcaatacattccaatcaacactgagcaggtaaaacccattttctatatattcca 320
Query: 121 taaaatacagttagttttatgtcccttacagtatagcaccaatgtgttccaggaaactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaaatacagttagttttatgtcccttacagtatagcaccaatgtgttccaggaaactca 380
Query: 181 atgcattttgtcttgttttggtttttgccatgtaatgaaccacatcctatcgagtgagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcattttgtcttgttttggtttttgccatgtaatgaaccacatcctatcgagtgagag 440
Query: 241 atgtgtgtaatatacgaagagaaagcaagaagtacattttcaaaagtctgaatggtaagt 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtgtgtaagatacgaagagaaagcaagaagtacattttcaaaagtctgaatggtaagt 500
Query: 301 tgtaatgatttacatagtgataagtttatataagaaatctatgatttcattgctgtttgc 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaatgatttatatagtgataagtttatataagaaatctatgatttcattgctgtttgc 560
Query: 361 gcacgcgcgtgcgcgcacacacacacagacacacatattcaaatacatacataaactagt 420
||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcacgtgcgcgcgcacacacacacacagacacacatattcaaatacatacataaactagt 620
Query: 421 ttaatagtaaagcataaaagtcacttgtatttttgagattctaactttccttacattagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaatagtaaagcataaaagtcacttgtatttttgagattctaactttccttacattagt 680
Query: 481 cgtgggggaaaatggatgccaagacaccctcacaagtctttcctacttttcatttcttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cgtgggggaaaatggatgccaagacaccctcacaagtctttcctacttttcatttcttct 740
Query: 541 gtattcatggncatcatgcactttgtatatgggtatatgaataaactcgttggtatgaac 600
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtattcatggtcatcatgcactttgtatatgggtatatgaataaactcgttggtatgaac 800
Query: 601 tgataggaaataaattttatttattgattcctgtttcctgaatgg 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgataggaaataaattttatttattgattcctgtttcctgaatgg 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_f19.g1 MSMg01no501_f19.g1 CHROMAT_FILE:
MSMg01no501_f19.g1 PHD_FILE: MSMg01no501_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:11 2005
(628 letters)
>mm_chr10_9346264_9347288
Length = 1025
Score = 891 bits (461), Expect = 0.0
Identities = 495/507 (97%), Gaps = 4/507 (0%)
Strand = Plus / Minus
Query: 1 tgactttgcattgcatctatagggacttatcttcaagagtcaatttctcattgtgtcttt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgactttgcattgcacctatagggacttatcttcaagagtcaatttctcattgtgtcttt 444
Query: 61 atccccatttatctaagcactggtgatttccttaatatctaaatgtaaatgatgaaaaga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 443 atccccatttatctaagcactggtgatttccttaatatctaaa-gtaaatgatgaaaaga 385
Query: 121 taacaccaagactcaaatcttgatcacgtcaatgattcatagttcctagaaaattaagtc 180
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 384 taacgccaagactcaaatcttgatcatgtcaatgattcatagttcctagaaaattaagtc 325
Query: 181 ataagcgacagggtcttagtttataatatcgagagatttagagaataattgcaaaagttt 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataagtgacagggtcttagtttataatatcgagagatttagagaataattgcaaaagttt 265
Query: 241 ctacagcttatttataaatgcgagtgtatgaagaaatctcacttatgcaaagtgttgctt 300
|||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 264 ctacagctta--aaaaaatgcgagtgtatgaggaaatctcacttatgcaaagtgttgctt 207
Query: 301 tgctcagtatggtggtacacagccataatcccaggaaaattccaagttcaaggccagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 tgctcagtatggtggtacacagccataatcccaggaaaattccaagttcaaggccagcct 147
Query: 361 aggttatatattgagaatctgtctctgtaagcaaatcggaacaaaacagagtaaaatagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 aggttatatattgagaatctgtctctgtaagcaaatcggaacaaaacagagtaaaatagg 87
Query: 421 aggggagtatggagacagcttagttggtcaagtttgtaccacacaagcaaggggaccagt 480
| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 86 a-gggagtatggagacagcttagttggtcaagtttgtaccacgcaagcaaggggaccagt 28
Query: 481 gtttgaacctcagaacccatataaaaa 507
|||||||||||||||||||||||||||
Sbjct: 27 gtttgaacctcagaacccatataaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1025
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1015
Effective search space: 627270
Effective search space used: 627270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
