Query= MSMg01no501_i10.b1 MSMg01no501_i10.b1 CHROMAT_FILE:
MSMg01no501_i10.b1 PHD_FILE: MSMg01no501_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:22 2005
(598 letters)
>mm_chr10_20284918_20285915
Length = 998
Score = 1100 bits (569), Expect = 0.0
Identities = 592/601 (98%), Gaps = 3/601 (0%)
Strand = Plus / Plus
Query: 1 ttatatgcacatataaacacttaaaatcataaatatacacatacctaacaggatagcgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ttatatgcacatataaacacttaaaatcataaatatacacatacctaacaggatagcgga 257
Query: 61 aataagaatttaagaactctgggttcagaataagatactttgataagattatgtgcatca 120
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 258 aataagaatctaagaactctgggttcagaataagatacttggataagattatgtgcatca 317
Query: 121 ctacaaatgttaagcttttatttttacttcaattctatcagctcaggtgaagtcagaata 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctacagatgttaagcttttatttttacttcaattctatcagctcaggtgaagtcagaata 377
Query: 181 gaatcttaagcaggattctctagagcacttgttctcacccttcccaatgctgtgaccctt 240
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 378 gaatcttaagtaggattctctagagcacttgttctcacccttcccaatgccgtgaccctt 437
Query: 241 caatacagtcccccatgttgcagtgaccccccaccataaaattattttgtcgctactcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 caatacagtcccccatgttgcagtgaccccccaccataaaattattttgtcgctactcca 497
Query: 301 aaactgtaatttc---actgttatgaatcttaatgtaaatatttgatatgcaggatatct 357
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 498 aaactgtaatttcgctactgttatgaatcttaatgtaaatatttgatatgtaggatatct 557
Query: 358 gatatgcaagatatctgatacaaaggatatctgacatgggacccttttggggtctgactc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gatatgcaagatatctgatacaaaggatatctgacatgggacccttttggggtctgactc 617
Query: 418 acaggttgcgaaccactagtttagagtttccttcttcatctcagtcactaaacatcagtt 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acaggttgcgaaccactagtttagagtttccttcttcatctcagtcactaaacatcagtt 677
Query: 478 taaacagtgaccaaattcctcatcagagctgtgggaacaggcgagagagtacagttcatg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 taaacagtgaccaaattcctcatcagagctgtgggaacaggcgagagagtacagttcatg 737
Query: 538 gttctagcagagcaatgggggaaagatgcgttgatgttatatcctcttgatgaagtaaca 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gttctagcagagcaatgggggaaagatgcgttgatgttatatcctcttgatgaagtaaca 797
Query: 598 g 598
|
Sbjct: 798 g 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_i10.g1 MSMg01no501_i10.g1 CHROMAT_FILE:
MSMg01no501_i10.g1 PHD_FILE: MSMg01no501_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:22 2005
(568 letters)
>mm_chr10_20463347_20464314
Length = 968
Score = 1036 bits (536), Expect = 0.0
Identities = 560/568 (98%)
Strand = Plus / Minus
Query: 1 tttgaagagttttagtttatgtaaccaacacaagcctttttgacttcctattatctgacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tttgaagagttttagtttatgtaaccaacacaagcctttttgacttcctattatctgacc 709
Query: 61 atatttgatcctgtgaatcttgaaaaaaaaataagtatattggtctgtctgccactttct 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 atatctgatcctgtgaatcttgaaaaaaaaataagtatattggtctgtctgccactttct 649
Query: 121 ggagtcttgtccaaatatcctcatctctgcctctgtctgcctactcatccccacgacacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ggagtcttgtccaaatatcctcatctctgcctctgtctgcctactcatccccacgacacg 589
Query: 181 acttctaacagtcttttccaaagtctgaaggttttcacttcttggaaatggactgttacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 acttctaacagtcttttccaaagtctgaaggttttcacttcttggaaatggactgttacc 529
Query: 241 aatttgtttacttctcttctgggaaacatgtctacctgttgaagtgataatagtgccagt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aatttgtttactgctcttctgggaaacatgtctacctgttgaagtgataatagtgccagt 469
Query: 301 gccctgtatattgctaaaagactcaagggagaaactatgttttacaacccatggaaggtt 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gccctgtgtattgctaaaagactcaagggagaaactatgttttacaacccatggaaggtt 409
Query: 361 agaagcagtttctcaatgtttctttagggcttcagaagaaaacttagaacaagtccatta 420
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agaagcactttctcaatgtttttttagggcttcagaagaaaacttagaacaagtccatta 349
Query: 421 accaccttgttctaattagaacacattaaagccagttatgactgtgaatattcacaaaaa 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 348 accaccttgttctaattagaacacattaaagccaattatgactgtgaatattcacaaaaa 289
Query: 481 tgactgagtagcccaaaaagggtggtttccacataaacattacccctgtctcagttttaa 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 288 tgactgagtagcccaaaaagggtggtttccacataaacattaccactgtctcagttttaa 229
Query: 541 gtggagaggcagcaatgtgtgtggacat 568
||||||| ||||||||||||||||||||
Sbjct: 228 gtggagaagcagcaatgtgtgtggacat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
