GACTCACTATTTCCAGAGAATCCGCGGAATTCATGCTGCTTTCTTTCTCT
TTTCCCTTTGCAATTGTCCCCATTCCTTTTGTGTTTCAAAATTAAGTCCC
ATTTCAGAAAGCTGCCAAGTGATCAATTAAACGTACTTCTAGTATCCCAT
GAAACTTTGTTTTGGCACACGATGAAAGAAGAGCGGGAGCCTGTGTTGTT
CTTCTTGGTCATCCGAGAGGTCCTCCTGCTGTGCCCATACATCTCCACGC
ATGGCATCAGCCATGCCGGTGGCTTTACAGCGTTTGTTTTTTGTTTGTTA
TGTTTTTTGAAATAAGTAATGGTGACCCTTATTTCTAACGTCATTCTTTT
GGGAATGTTAAGTAATTCGTCGGCTGTCAAGCGAGAATCCCTTCAGGAGC
TAACTTGAACCTGTAGAGTGATTAGAAAAATGAGGCCCCTTTACAGAAAC
TGGGTTGCTACGGTCCGCCGCCCTTTCCAGAGGATCTGCGGTGTGGCACG
CTACTGTGAGACTGGAAGGTAGCCTGGTGTGGCACGCTACTGTGAGACTG
GAAGGTAGCCTTTCTAGATCCCGGGCGAGGAGGATCTTAGTTCCTTGCAG
TCATCTTCCCAGTGCTGTTGTGTGCTAGCAGCAGCTTCCCAGGGAGATGT
GAGACCCAGTGCAATTGCTGCAAGACCCAGGGCAT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTTGAAAAATGG
CTCACATCCTTTATCATCANGGAAATGCAAATCANNNACACCCTGAGATT
TCCACTCACNACAGTCAAAATGGCTTAGATCAAAATTTCGGTGACAGCCG
ATTTTCNNNTTGNNNNNNNNTCGGCGGGGGCGGNCNNNNNNCNNNNNNNN
CCTTTTNNNNGGGGGGTTCTGGGGGGGCTCCTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNTTNNNNNTTTTTN
TTTTTTTNNNAAATTTTTTTNNAANTTTNNNNTTATAATAAAANANNNNA
NNNTTTTTTTTTTTTTATATTATTGTGTTGTGTTTG

Query= MSMg01no501_j06.b1 MSMg01no501_j06.b1 CHROMAT_FILE:
MSMg01no501_j06.b1 PHD_FILE: MSMg01no501_j06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:26 2005
         (619 letters)



>mm_chr10_120513755_120514771
          Length = 1017

 Score = 1118 bits (578), Expect = 0.0
 Identities = 606/618 (98%), Gaps = 8/618 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatgctgctttc---tttctcttttccctttgcaattgtccccattccttttgtg 61
           |||||||||||||   |   ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcatgctgc---caaatttctcttttccctttgcaattgtccccatttcttttgtg 261

                                                                       
Query: 62  tttcaaaattaagtcccatttcagaaagctgccaagtgatcaattaaacgtacttctagt 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tttcaaaattaagtcccatttcagaaagctgccaagtgatcaattaaacgtacttctagt 321

                                                                       
Query: 122 atcccatgaaactttgttttggcacacgatgaaagaagagcgggagcctgtgttgttctt 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 atcccatgaaactttgttttggcacacgatgaaagaagagcgggagcctgtgttgttctt 381

                                                                       
Query: 182 cttggtcatccgagaggtcctcctgctgtgcccatacatctccacgcatggcatcagcca 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cttggtcatccgagaggtcctcctgctgtgcccatacatctccacgcatggcatcagcca 441

                                                                       
Query: 242 tgccggtggctttacagcgtttgttttttgtttgttatgttttttgaaataagtaatggt 301
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 tgccggtggctttacagcgtttgttttttgtttgtta-gttttttgaaataagtaatggt 500

                                                                       
Query: 302 gacccttatttctaacgtcattcttttgggaatgttaagtaattcgtcggctgtcaagcg 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacccttatttctaacgtcattcttttgggaatgttaagtaattcgtcggctgtcaagcg 560

                                                                       
Query: 362 agaatcccttcaggagctaacttgaacctgtagagtgattagaaaaatgaggccccttta 421
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 agaatcccttcaggagctaacttgaacctgtagagtgattagaaaa-tgaggccccttta 619

                                                                       
Query: 422 cagaaactgggttgctacggtccgccgccctttccagaggatctgcggtgtggcacgcta 481
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 620 cagaaactgggttgctacggtctgccgccctttccagaggatctgcggtgtggcacgcta 679

                                                                       
Query: 482 ctgtgagactggaaggtagcctggtgtggcacgctactgtgagactggaaggtagccttt 541
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 680 ctgtgagactggaaggtagcctggtgtggcatgctactgtgagactggaaggtagccttt 739

                                                                       
Query: 542 ctagatcccgggcgaggaggatcttagttccttgcagtcatcttcccagtgctgttgtgt 601
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 740 ctagatcccgggcgaggaggatcttagttccttgcagtcatcttcccagtgctgatgtgt 799

                             
Query: 602 gctagcagcagcttccca 619
           ||||||||||||||||||
Sbjct: 800 gctagcagcagcttccca 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1017
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1007
Effective search space:   613263
Effective search space used:   613263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)