Query= MSMg01no502_l16.b1 MSMg01no502_l16.b1 CHROMAT_FILE:
MSMg01no502_l16.b1 PHD_FILE: MSMg01no502_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:50 2005
(672 letters)
>mm_chr10_114681047_114682118
Length = 1072
Score = 1284 bits (664), Expect = 0.0
Identities = 670/672 (99%)
Strand = Plus / Plus
Query: 1 tagtacaaaaaagcatctgtattacatgcatgcacatttttcttattatcccctaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagtacaaaaaagcatctgtattacatgcatgcacatttttcttattatcccctaaacaa 260
Query: 61 tacagcattatcttcaatttacatagcttttctattatgcaggtattacaaaaagagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacagcattatcttcaatttacatagcttttctattatgcaggtattacaaaaagagcat 320
Query: 121 gagaaggtacacagattacatgcaaaaaattaaaataaatattttaaaatgacctagcat 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaaggtgcacagattacatgcaaaaaattaaaataaatattttaaaatgacctagcat 380
Query: 181 taatcctagcattcatgagaaaggagtaggcaaatgtctgagttccaggccagaaggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatcctagcattcatgagaaaggagtaggcaaatgtctgagttccaggccagaaggaac 440
Query: 241 acaggatgtccaacagtatttcctagggtgggactagtgagaagctcaacagaaaaaagc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggaggtccaacagtatttcctagggtgggactagtgagaagctcaacagaaaaaagc 500
Query: 301 acgaggcctcatgacccgagttggagccccagatcctgtggagagctgagttatcttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgaggcctcatgacccgagttggagccccagatcctgtggagagctgagttatcttctg 560
Query: 361 acttccattcatacctatgaaatggcatgtgcactaatgatgtgcttactaacattaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttccattcatacctatgaaatggcatgtgcactaatgatgtgcttactaacattaata 620
Query: 421 gcgtttagcaaaggaactagaccagataacttattaaaatacctctgaaaccaggtacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcgtttagcaaaggaactagaccagataacttattaaaatacctctgaaaccaggtacta 680
Query: 481 ttgcacatgctataatctcagcactgggaggctgaagcagaggcatatagagtttaaggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttgcacatgctataatctcagcactgggaggctgaagcagaggcatatagagtttaaggt 740
Query: 541 catccacagccttataacgagttcaaggccaaccctggttttcatgaactgctattgact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 catccacagccttataacgagttcaaggccaaccctggttttcatgaactgctattgact 800
Query: 601 caaaggatgctgaggaaaggatgataataataatttactaaagagctctgaggactatag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 caaaggatgctgaggaaaggatgataataataatttactaaagagctctgaggactatag 860
Query: 661 aaaatgatttat 672
||||||||||||
Sbjct: 861 aaaatgatttat 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_l16.g1 MSMg01no502_l16.g1 CHROMAT_FILE:
MSMg01no502_l16.g1 PHD_FILE: MSMg01no502_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:50 2005
(664 letters)
>mm_chr10_114824662_114825725
Length = 1064
Score = 808 bits (418), Expect = 0.0
Identities = 465/484 (96%), Gaps = 8/484 (1%)
Strand = Plus / Minus
Query: 1 caaagtagctacaatgtgaacccatgatccaaacaacaataaaaagaactgacacagatt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caaagtagctactatgtgaacccatgatccaaacaacaataaaaagaactgacacagatt 421
Query: 61 cttgtctattctgttttctttgaagttgcaaataacgtatcctatttaagttaacaatag 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 420 cttgtctattctgttttctttgaagctgcaaataacgtatcctatttaagttaacaatag 361
Query: 121 acaaaaattatactcaagatgtttggtttctaaatcagttaagtgagtcagaattacact 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 360 acaaaaattatactcaagatgtttcatttctaaatcagttaagtgagtcagaattacact 301
Query: 181 cattcttttctaagcaatatctgtaaagtagtcatttatataaccacagtagacatatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cattcttttctaagcaatatctgtaaagtagtcatttatataaccacagtagacatatga 241
Query: 241 attaatctaagtatgatacagatattaaaaaaaaaatgtggccaggcagtggtggcgtac 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 240 attaagctaagtatgatacagatattaaaaaaaaaatgtggccaggcagtggtggcgcac 181
Query: 301 gcctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcc 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 180 gcctttaatcccagcactcgggaggcagaggcaggtggatttctgagttcgaggccagcc 121
Query: 361 tggtctacagagtgagttccaggacagcca-gaatacagatacagagaaaccctgtctca 419
|||||||||||||||||||||||||||||| | ||| |||||||||||||||||||
Sbjct: 120 tggtctacagagtgagttccaggacagccagggctac----acagagaaaccctgtctca 65
Query: 420 ggaag---aaaaaaaaaaaaaagtggataaagctttgtatccaagttttatttgctcaca 476
||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 64 ggaagaaaaaaaaaaaaaaaaagtggataaaaatttgtatccaagttttatttgctcaca 5
Query: 477 ttat 480
||||
Sbjct: 4 ttat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
