Query= MSMg01no502_o09.b1 MSMg01no502_o09.b1 CHROMAT_FILE:
MSMg01no502_o09.b1 PHD_FILE: MSMg01no502_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:02 2005
(410 letters)
>mm_chr10_50844675_50845485
Length = 811
Score = 725 bits (375), Expect = 0.0
Identities = 402/411 (97%), Gaps = 1/411 (0%)
Strand = Plus / Minus
Query: 1 taatggaaaattctcccactaaaactaacttttctactcaatttactacctgcctctaga 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 taatggaaaattttcccactaaaactaacttttctactcaatttactacctgcctctaga 552
Query: 61 atattgcagtctgaaatacttaaaacagggtcagagact-aaaatctctagtatctctta 119
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 551 atattgcagtctgaaatacttaaaacagggtcagagactaaaaatctctagtatctctta 492
Query: 120 tcatttgtattgaaaacaaatgcagatttctctttcatgcataagtctttgcaatgagtg 179
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcatctgtattgaaaacaaatgcagatttctctttcatgcataagtctttgcaatgagtg 432
Query: 180 ctcctctagaaatcactaaaatactacaattctcctcaaaggcattgatgtctaaaaaga 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 431 ctcctctagaaatcactaaaatactacaattctcctcaaaggcatcgatgtctaaaaaga 372
Query: 240 gacacatattctatttctaaaggaagagagaacatttaatagacaatgttttatgaaaac 299
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 371 gacacatattctatttctaaaggaacagagaacattttatagacaatgttttatgaaaac 312
Query: 300 tagcctgtgtatgttccagtttgctactggactttacatctcagatcagaagactgactc 359
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 311 tagcctgtgtatgttccagtttgcaactggactttacatctcagatcagaagactgactc 252
Query: 360 caaatgagcatctttcccaagggcagtaaaccacaagagtggtttgtttga 410
|||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 251 caaatgggcatcttccccaagggcagtaaaccacaagagtggtttgtttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 811
Length adjustment: 9
Effective length of query: 401
Effective length of database: 802
Effective search space: 321602
Effective search space used: 321602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_o09.g1 MSMg01no502_o09.g1 CHROMAT_FILE:
MSMg01no502_o09.g1 PHD_FILE: MSMg01no502_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:02 2005
(663 letters)
>mm_chr10_50724816_50725878
Length = 1063
Score = 1062 bits (549), Expect = 0.0
Identities = 615/663 (92%), Gaps = 40/663 (6%)
Strand = Plus / Plus
Query: 1 gcttagatggacatatatgtaccacacacttgctgcatgtttgcagagtcagaatagggt 60
||||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 gcttagatgtacatgtatgcaccacatacttgctgcatgtttgcagagtcagaatagggt 260
Query: 61 atggaaagttttgggctgccatgtggttttgagaactgaactctggttctgggcaagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggaaagttttgggctgccatgtggttttgagaactgaactctggttctgggcaagagc 320
Query: 121 agcaccagtcatcaaacaagaggacactgagtcatctccctagctgctttattgttacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcaccagtcatcaaacaagaggacactgagtcatctccctagctgctttattgttacat 380
Query: 181 ttcttctaaggtatttactaagatcacatagatttcttttctgtcttgtcttttcctgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttctaaggtatttactaagatcacatagatttcttttctgtcttgtcttttcctgta 440
Query: 241 tgtttttttaatttgggcttaacacagaaagtgctcttttttgcatagttaacttacatt 300
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tgtttgtttaatttgggcttaacacagaaagtactcttttttgcatagttaacttacatt 500
Query: 301 attcatatctgttaaaacattatgatttcaaacactttcaatcactgtgttgatttttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attcatatctgttaaaacattatgatttcaaacactttcaatcactgtgttgatttttct 560
Query: 361 ttgtaaacagcagtgcttatttcacaattttaaaatgtatttccttaatgtttttaaaat 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 ttgtaaacagcagtgcttatttcacaattttaaaatgtatttccttaatgttcttaaaat 620
Query: 421 tataaattcttttagattattggtggatgcttaaattgtatgaaatgccttttggcaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataaattcttttagattattggtggatgcttaaattgtatgaaatgccttttggcaaac 680
Query: 481 agaatagttatttttttaaacttgaaatatttttttcctaagctgaaacattcttacttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaatagttatttttttaaacttgaaatatttttttcctaagctgaaacattcttacttt 740
Query: 541 gtgacatatatatacatatatatacatatatatatatatatatatatatatatatatata 600
||||||||||||||||||||||||
Sbjct: 741 gtgacatatatatacatatatata------------------------------------ 764
Query: 601 tatatataaatattaggagctttggatacatacacactctcacacatatatatgcataca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 765 ----tataaatattaggagctttggatacatacacactctcacacatatatatgcatgca 820
Query: 661 cac 663
|||
Sbjct: 821 cac 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
