Query= MSMg01no503_d09.b1 MSMg01no503_d09.b1 CHROMAT_FILE:
MSMg01no503_d09.b1 PHD_FILE: MSMg01no503_d09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:26 2005
(480 letters)
>mm_chr10_127909829_127910708
Length = 880
Score = 909 bits (470), Expect = 0.0
Identities = 479/484 (98%), Gaps = 4/484 (0%)
Strand = Plus / Minus
Query: 1 cctgcactcctgaaccatccctctgcctgctgagtgctaggactagagacatgacccaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cctgcactcctgaaccatccctctgcctgctgagtgctaggactagagacatgacccaca 479
Query: 61 cttggctttccttccttttgactctgagactgtccccttcagttatgcaggttggcctca 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cttggctttccttcctttttactctgagactgtccccttcagttatgcaggttggcctca 419
Query: 121 ggggtcattctgcaggccaggctgattctgtacttcttacatcctcctgcctcagccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggggtcattctgcaggccaggctgattctgtacttcttacatcctcctgcctcagccagg 359
Query: 181 caggccactgagattattacctatgttatgccaccaggctgagttaaatgatgtgctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 caggccactgagattattacctatgttatgccaccaggctgagttaaatgatgtgctctt 299
Query: 241 aactagtaacactgttgctttgttttttcc----cagagtctcactctgtagctctggct 296
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 298 aactagtaacactgttgctttgttttttcccagacagagtctcactctgtagctctggct 239
Query: 297 gtcttggaactcactatgtaggccaggctggccttgaactcacagagattcacctgcatc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gtcttggaactcactatgtaggccaggctggccttgaactcacagagattcacctgcatc 179
Query: 357 tgcttcctgggtgctgagattaaaggtgtttaccaccgtttccagtcagatcttaattaa 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tgcttcctgggtgctgagattaaaggtgtttaccaccgtttccagtcagatcttaattaa 119
Query: 417 tttttgaagacagggtctctgtatgaaacctggctgtcctggaacttgtgaccaggctag 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 tttttgaagacagggtctctgtatgaaacctggctgtcctggaacttgtgaccaggctag 59
Query: 477 cctc 480
||||
Sbjct: 58 cctc 55
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_d09.g1 MSMg01no503_d09.g1 CHROMAT_FILE:
MSMg01no503_d09.g1 PHD_FILE: MSMg01no503_d09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:26 2005
(251 letters)
>mm_chr10_127726802_127727452
Length = 651
Score = 485 bits (251), Expect = e-142
Identities = 251/251 (100%)
Strand = Plus / Plus
Query: 1 cctctcttctggcccccacatgtatcaggtatgcatgtggtatacatacatacgcacaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctctcttctggcccccacatgtatcaggtatgcatgtggtatacatacatacgcacaag 260
Query: 61 caaaatacttgtgcacagaaaatgaaaactgaaattcaaaacctgtaaataataatctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaatacttgtgcacagaaaatgaaaactgaaattcaaaacctgtaaataataatctga 320
Query: 121 gatttacccaatcactaaatgagaggattcaaatcctaacaagcctggtttcaaggccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttacccaatcactaaatgagaggattcaaatcctaacaagcctggtttcaaggccag 380
Query: 181 atgtggctagtgcctctaatgccagtgcttgggaagtggaaggcagaagttccagtctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtggctagtgcctctaatgccagtgcttgggaagtggaaggcagaagttccagtctag 440
Query: 241 ccttgcctatg 251
|||||||||||
Sbjct: 441 ccttgcctatg 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
