Query= MSMg01no503_d10.b1 MSMg01no503_d10.b1 CHROMAT_FILE:
MSMg01no503_d10.b1 PHD_FILE: MSMg01no503_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:26 2005
(541 letters)
>mm_chr10_110436272_110437210
Length = 939
Score = 949 bits (491), Expect = 0.0
Identities = 528/541 (97%), Gaps = 2/541 (0%)
Strand = Plus / Minus
Query: 1 ttaatgcatgccagctagagtatttctttggtaagtcagagtacttcccagtggacttct 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 ttaatacatgccagctagagtatttctttggtaagtcagagtacttcccagtggacttct 680
Query: 61 gagtaccctcatgtgttggtgagatgagatggagggctaagcggaactgaaggattatat 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 679 gagtaccctcatgtgttggtgagatgagatggagggctaagcgggactgaaggattatat 620
Query: 121 atgccaaacggcttctgtttttagtcgttgccatattctagggggaaaaaaccacaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgccaaacggcttctgtttttagtcgttgccatattctagggggaaaaaaccacaagtg 560
Query: 181 aatgattttctgattatagccactttctaatttatgaaggatttgatgagagatgaacaa 240
|||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 559 aatg--tttctgattatggccacgttctaatttatgaaggatttgatgagagatgaacaa 502
Query: 241 aactaatgtgattgtgatttccctattttcataggaaaaaaaatctggtttttacactga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactaatgtgattgtgatttccctattttcataggaaaaaaaatctggtttttacactga 442
Query: 301 ttatggagttgctcttactttattagaaacttctggttacacatgaccacaacttaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 ttatggagttgctcttactttattagaaacttctggttacacatgaccaaaacttaaagc 382
Query: 361 ttagccgtgtacagggaggatttgatttgctgcctcagacaccccacaaggtcatgccag 420
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ttaaccgtgtacagggaggatttgatttgctgcctcagacactccacaaggtcatgccag 322
Query: 421 gcacagtctcactgaaggacagccacagcctgggcagagactctctctcttacctctctt 480
|| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 321 gcgcagtctcactgaaggacagccacagcctgggcagagactctctttctcacctctctt 262
Query: 481 gcttccagcagtgtgctctcctactggagagcagctttcttctctctatgtgatagagac 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcttccagcagtgtgctcttctactggagagcagctttcttctctctatgtgatagagac 202
Query: 541 a 541
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 939
Length adjustment: 10
Effective length of query: 531
Effective length of database: 929
Effective search space: 493299
Effective search space used: 493299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_d10.g1 MSMg01no503_d10.g1 CHROMAT_FILE:
MSMg01no503_d10.g1 PHD_FILE: MSMg01no503_d10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:26 2005
(522 letters)
>mm_chr10_110303145_110304065
Length = 921
Score = 971 bits (502), Expect = 0.0
Identities = 517/522 (99%), Gaps = 1/522 (0%)
Strand = Plus / Plus
Query: 1 cagtgtgcgccagtgacagtcagcgggtacaggtgatatagtgttggattaagatgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgtgcgccagtgacagtcagcgggtacaggtgatatagtgttggattaagatgtttt 260
Query: 61 ggattgagtttaatgttagttctgccacagatgcagagtgagctgctcatgaaaaatctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggattgagtttaatgttagttctgccacagatgcagagtgagctgctcatgaaaaatctg 320
Query: 121 tgaaccgctctctactgcccattattagataacccctccccacccccaagacactttcac 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 tgaaccgctctctactgcccattattagataacccctccccccccccaagacactttcac 380
Query: 181 ctgagttattttaataatggagactaagtactaaagtgaaaagaccttaatggaaagttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgagttattttaataatggagactaagtactaaagtgaaaagaccttaatggaaagttt 440
Query: 241 ttttgtattaacagaagtcagacgatacagtctctggtgtactggttagaagatgtcagg 300
| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcatg-agtaacagaagtcagacgatacagtctctggtgtactggttagaagatgtcagg 499
Query: 301 gaagttccatagtttttccaagtcacacagcaggatgaagggcacacctccaactcgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaagttccatagtttttccaagtcacacagcaggatgaagggcacacctccaactcgcca 559
Query: 361 gctttgttttcacaaagcacgattatctctcttagatgctcacccattctgccaggcatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctttgttttcacaaagcacgattatctctcttagatgctcacccattctgccaggcatc 619
Query: 421 aaagcttattaaacagctactatagtccaggtattatgacaatggatagagactttaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaagcttattaaacagctactatagtccaggtattatgacaatggatagagactttaaaa 679
Query: 481 aacagatgtgactatctttgtctagaggaagctgacagtcca 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aacagatgtgactatctttgtctagaggaagctgacagtcca 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 921
Length adjustment: 10
Effective length of query: 512
Effective length of database: 911
Effective search space: 466432
Effective search space used: 466432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
