Query= MSMg01no503_k24.b1 MSMg01no503_k24.b1 CHROMAT_FILE:
MSMg01no503_k24.b1 PHD_FILE: MSMg01no503_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:02 2005
(458 letters)
>mm_chr10_30170303_30171158
Length = 856
Score = 799 bits (413), Expect = 0.0
Identities = 443/453 (97%), Gaps = 4/453 (0%)
Strand = Plus / Plus
Query: 7 aatttgctgatat-ttgcacagttttagaatgcagttaggaattatggtggtttggtaag 65
||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 207 aatttgctgatataatg-acagttttagaatgcagttaggaattacggtggtttggtaag 265
Query: 66 gtggtggttgttggttctcctccaacattcatgacatcattagtcatgagcattttgtct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtggtggttgttggttctcctccaacattcatgacatcattagtcatgagcattttgtct 325
Query: 126 cggttcccagtgccaggcatggtttcccttgtgttgagcgggctcattatggggtttttg 185
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 326 cggttcccagtgccaggcatggtttccctcgtgttgagcgggctcattatggggtttttg 385
Query: 186 taatactctgttcttatccatcttttcactctacttttgcccagcacccctgttttcttt 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 taatactctgttcttatccatcttttcactctacttttgcccagcacccctgttttcttt 445
Query: 246 attgcactcaaatgtcccctttttgcttttatgtcacatatatgccataacatttttttc 305
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 446 attgcactcaaatgtcccctttttgcttttatgtcacatatatgccataacatttttt-c 504
Query: 306 catgcttaagatattgtctttctgcttcttctttcttgatccccacacatctaaatctat 365
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 catgcttaagatactgtctttctgcttcttctttcttgatccccacacatctaaatctat 564
Query: 366 gttccacataggaaggaaaaacacagttgctgtggtttgaatgtgaaacgctccctattg 425
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 565 gttccacataggaag-aaaaacacagttgctgtggtttgaatgtgaaacgctccctatcg 623
Query: 426 tttgtcggaacacatctggtaccatttggtaag 458
|| ||||||||||||||||||||||||||||||
Sbjct: 624 ttcgtcggaacacatctggtaccatttggtaag 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 856
Length adjustment: 10
Effective length of query: 448
Effective length of database: 846
Effective search space: 379008
Effective search space used: 379008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_k24.g1 MSMg01no503_k24.g1 CHROMAT_FILE:
MSMg01no503_k24.g1 PHD_FILE: MSMg01no503_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:02 2005
(349 letters)
>mm_chr10_30238366_30239114
Length = 749
Score = 613 bits (317), Expect = e-180
Identities = 343/355 (96%), Gaps = 10/355 (2%)
Strand = Plus / Minus
Query: 1 tcgtgcaatttcatcaaaggaaccttcagcttatgacatgtatagtgtccaccctctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcgtgcaatttcatcaaaggaaccttcagcttatgacatgtatagtgtccaccctctgga 445
Query: 61 gagtgtattttggtgaactgcatatctgtctgggggcaccaattctattagctgctctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagtgtattttggtgaactgcatatctgtctgggggcaccaattctattagctgctctct 385
Query: 121 ttagaaatcttaggagatggtttgagtgttccattgattgaaagggatttaggtgttttg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttagaaatcttaggagatgctttgagtgttccattgattgaaagggatttaggtgttttg 325
Query: 181 gttttttgtttatttgttttgcaaatgttgaattaagtctaattttttttttttgaacac 240
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 324 gttttttgtttatttattttgcaaatgttgaattaagtctaa-tttttttttttgaacac 266
Query: 241 tgtaaatcttaaaataatcccactgactgaagaccagagtagcttgctggatgttt-ggt 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 tgtaaatcttaaaataatcccactgactgaagaccagagtagcttgctggatgtttgggt 206
Query: 300 ttttt--ttgt---tgttgtttattttgttgttgttgttgttgtttgttttgttt 349
||||| |||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 ttttttgttgttgctgttgtttatt---ttgttgttgttgttgtttgttttgttt 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
