Query= MSMg01no504_g15.b1 MSMg01no504_g15.b1 CHROMAT_FILE:
MSMg01no504_g15.b1 PHD_FILE: MSMg01no504_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:01 2005
(621 letters)
>mm_chr10_68203972_68204991
Length = 1020
Score = 1170 bits (605), Expect = 0.0
Identities = 617/621 (99%), Gaps = 1/621 (0%)
Strand = Plus / Minus
Query: 1 aaatcacattcacagagatagggaaatagcttggtgactagaagtgtttgctgtccaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aaatcacattcacagagatagggaaatagcttggtgactagaagtgtttgctgtccaagc 726
Query: 61 atgaggagtagagtgcaaatcccaacaaccatatgaaaggtaagctctgatgcatgatcc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 725 atgaggagtagagtgcaaatcccaacaaccatatgaaaggtaagctctgatgcatgattc 666
Query: 121 atgtccccagagcaggcagggagagagacagacacaggagaatcgctgggggcttactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 atgtccccagagcaggcagggagagagacagacacaggagaatcgctgggggcttactga 606
Query: 181 tagagttcagggacagggtcttgccttgaggagaatcagaagagagtgacagagagcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tagagttcagggacagggtcttgccttgaggagaatcagaagagagtgacagagagcatc 546
Query: 241 ctgtgtctttctaatcgcttctgcaggaagaacacagttatagatatgcatgtgcctgta 300
||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctgtgtc-ttccattcgcttctgcaggaagaacacagttatagatatgcatgtgcctgta 487
Query: 301 taccagaccaacacacatactacatacacacatcatgttcacattcccccatgaaccata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 taccagaccaacacacatactacatacacacatcatgttcacattcccccatgaaccata 427
Query: 361 gctagtgtgttgtagggacaggagggtggatcatagacaaagattactgtacttgctcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gctagtgtgttgtagggacaggagggtggatcatagacaaagattactgtacttgctcca 367
Query: 421 gtttggtcaacttgacacaagctagggtcacccgagaagagagaaagtcagtggagaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gtttggtcaacttgacacaagctagggtcacccgagaagagagaaagtcagtggagaaaa 307
Query: 481 tggccttatcagactggcctattgaaaagctaaggaggtattttgttaatggattattca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tggccttatcagactggcctattgaaaagctaaggaggtattttgttaatggattattca 247
Query: 541 cgtagaaggtcctggatcaggatggacaagccatggcgagcaagccagtaagcagcaccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 cgtagaaggtcctggatcaggatggacaagccatggcgagcaagccagtaagcagcaccc 187
Query: 601 ctccatggcctctgctttagt 621
|||||||||||||||||||||
Sbjct: 186 ctccatggcctctgctttagt 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1020
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1010
Effective search space: 617110
Effective search space used: 617110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_g15.g1 MSMg01no504_g15.g1 CHROMAT_FILE:
MSMg01no504_g15.g1 PHD_FILE: MSMg01no504_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:01 2005
(531 letters)
>mm_chr10_68017439_68018367
Length = 929
Score = 936 bits (484), Expect = 0.0
Identities = 527/560 (94%), Gaps = 31/560 (5%)
Strand = Plus / Plus
Query: 1 attgccaaaaatttggaaaggaaagctcaaattgctttaatgttgttaggaaagatagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 attgccaaaaatttggaaaggaaagctcaaattgctttaatgttgttaggaaagatagat 231
Query: 61 caaacaataggatttcttttatacatatacatacatacatatatat-tttttccttatat 119
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 232 caaacaataggatttcttttatacatatacatacatacatatatatatttttccttatat 291
Query: 120 atatttttatatacatatatacatatatacacacatctatctatctatctatc------- 172
||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 292 atatttttatatacatatatatatatatacacacatctatctatctatctatctatctat 351
Query: 173 ---------------------atctatctatctatttatctatctatatctatatatcta 211
|||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ctatctatctatctatcatctatctatctatctatttatctatctatatctatatatcta 411
Query: 212 tatatataatagcaaaacccatgtctttgcattatggaatttttttttaggtctcttcat 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tatatataatagcaaaacccatgtctttgcattatggaatttttttttaggtctcttcat 471
Query: 272 ccatgaaacaagaagaagggtgttagcatccaaaagatgatgtggccagtatgtagcctc 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ccatgaaacaagaagaagggtgttagcatccaaaagatgatgtggccagtatgtagcctc 531
Query: 332 cccccccaaccgccccccatctctcttcatcaagtttgggaatcagagaacctagcctag 391
| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 caccccc--ccgccccccatctctcttcatcaagtttgggaatcagagaacctagcctag 589
Query: 392 cacatttatagccaagggccatcctgccatctgctccagaagcaccctcattcttaaatc 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 cacatttatagccaagggccatcctgccatctgctccagaagcaccctcattcttaaatc 649
Query: 452 tagaatttggcatacagagcattttatacaagtcgatcttctaagaagcttctagaagtt 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tagaatttggcatacagagcattttatacaagtcgatcttctaagaagcttctagaagtt 709
Query: 512 aaaagctacacgccctccaa 531
||||||||||||||||||||
Sbjct: 710 aaaagctacacgccctccaa 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 929
Length adjustment: 10
Effective length of query: 521
Effective length of database: 919
Effective search space: 478799
Effective search space used: 478799
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
