Query= MSMg01no504_l13.b1 MSMg01no504_l13.b1 CHROMAT_FILE:
MSMg01no504_l13.b1 PHD_FILE: MSMg01no504_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:24 2005
(179 letters)
>mm_chr10_42293393_42293970
Length = 578
Score = 333 bits (172), Expect = 5e-96
Identities = 175/176 (99%), Gaps = 1/176 (0%)
Strand = Plus / Minus
Query: 1 agaggaaagtgggagatttcaggtcctcgttggcaaattcagtatagccattgagttggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 agaggaaagtgggagatttcaggtcctcgttggcaaattcagtatagccattgagttggc 316
Query: 61 cttaagctttccaatagccttttcggtggaccagaagagagagaaggggggggtggctaa 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 315 cttaagctttccaatagccttttcggtggaccagaagagagagaa-gggggggtggctaa 257
Query: 121 agaggaaggatgacacacagtggtgtgtcacacatcaggggcctgcccacatccca 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agaggaaggatgacacacagtggtgtgtcacacatcaggggcctgcccacatccca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 578
Length adjustment: 8
Effective length of query: 171
Effective length of database: 570
Effective search space: 97470
Effective search space used: 97470
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no504_l13.g1 MSMg01no504_l13.g1 CHROMAT_FILE:
MSMg01no504_l13.g1 PHD_FILE: MSMg01no504_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:24 2005
(611 letters)
>mm_chr10_42118954_42119964
Length = 1011
Score = 1181 bits (611), Expect = 0.0
Identities = 611/611 (100%)
Strand = Plus / Plus
Query: 1 ttctgagttagtacaggcaccaacaataatccagcgctatggtaaagaacttgtctgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctgagttagtacaggcaccaacaataatccagcgctatggtaaagaacttgtctgact 260
Query: 61 gtgtgcttagagtatctaaagctatttcaactcttccttcttagcacgaaaatttgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtgcttagagtatctaaagctatttcaactcttccttcttagcacgaaaatttgaagt 320
Query: 121 ttagtttttgctaaataaaactttattcttttttgaatatgttgatatgcatcaagacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagtttttgctaaataaaactttattcttttttgaatatgttgatatgcatcaagacca 380
Query: 181 tttgcatatctaaaattagataaattacatttggcacataattgagcgtcatttgggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgcatatctaaaattagataaattacatttggcacataattgagcgtcatttgggaac 440
Query: 241 tctatactttgctttctgcgttaagtatttgtgtacagtttgcattctcaacaagattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctatactttgctttctgcgttaagtatttgtgtacagtttgcattctcaacaagattat 500
Query: 301 agagataaaaaccacctatttcataattctattacctactatgactagtgtggcagcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagataaaaaccacctatttcataattctattacctactatgactagtgtggcagcttg 560
Query: 361 cacagagtaggttttcaagaaatattggtaggctatagaattagtgaataatcatgcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagagtaggttttcaagaaatattggtaggctatagaattagtgaataatcatgcaaa 620
Query: 421 aattacttaaaattaacagtaaaaaggggaggctattttatcttaatgatattgtaatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattacttaaaattaacagtaaaaaggggaggctattttatcttaatgatattgtaatga 680
Query: 481 agactattttaaactctgtgcggcaatgacacacacaaatatttaaactatttatgtgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agactattttaaactctgtgcggcaatgacacacacaaatatttaaactatttatgtgcc 740
Query: 541 tcaacttgacataatttcatgataacttgatggcaatcacatttaaatatattagaatat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcaacttgacataatttcatgataacttgatggcaatcacatttaaatatattagaatat 800
Query: 601 tttcgtaataa 611
|||||||||||
Sbjct: 801 tttcgtaataa 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
