Query= MSMg01no504_o22.b1 MSMg01no504_o22.b1 CHROMAT_FILE:
MSMg01no504_o22.b1 PHD_FILE: MSMg01no504_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:42 2005
(582 letters)
>mm_chr10_54611082_54612064
Length = 983
Score = 1075 bits (556), Expect = 0.0
Identities = 574/580 (98%), Gaps = 1/580 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcttattac-gcaagcctatctaccttagaaaactcaaaattgggaacctgcc 62
|||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 783 ggaattctcttaagacagcaagcctatctaccttagaaaacccaaaattgggaacctgcc 724
Query: 63 aaggatcagaaaggattagaatcaagtcctgagaaactatcctggggctttttaatcttc 122
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 723 aaggatcagaaaggattagaatcaagtcctgagaaactatccaggggctttttaatcttc 664
Query: 123 tgcgttttctttgttttgagaatctgatgattctgcttttcccactccccccttagacat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 tgcgttttctttgttttgagaatctgatgattctgcttttcccactccccccttagacat 604
Query: 183 atggaagaccatcttatagaaaaccacgatttactcctttcaatataagcacagaaaatg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 atggaagaccatcttatagaaaaccacgatttactcctttcaatataagcacagaaaatg 544
Query: 243 tgacatgtagctgtagtcacattttggatttaagaatagtctaataatctcatgaggcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tgacatgtagctgtagtcacattttggatttaagaatagtctaataatctcatgaggcat 484
Query: 303 tgaaggtccaacccagaactcatgtaaaatatacattgtgctatttcattcttatgttga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 tgaaggtccaacccagaactcatgtaaaatatacattgtgctatttcattcttatgttga 424
Query: 363 ggtaaattaaactggacttcataatggggttaaaagtcaatgcaagttcataatctagta 422
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 423 ggtaaattaaactggacttcataatggggttaaaaatcaatgcaagttcataatctagta 364
Query: 423 actgagtcattggttgtaattcaactgaggagacaacagtcttaaacattgtctttacat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 actgagtcattggttgtaattcaactgaggagacaacagtcttaaacattgtctttacat 304
Query: 483 agatattgcatcattcccttggctcctaacatgtctgaaaggagaacaaagatgtgacat 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 agatattgcatcattcccttggctcctaacatgtctgaaaggagaacaaagatgtgacat 244
Query: 543 aaatgacttctaagggctacaacaagttcacttcctgaat 582
||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaatgacttctaagggctacaacaagttcacttcctgaat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 983
Length adjustment: 10
Effective length of query: 572
Effective length of database: 973
Effective search space: 556556
Effective search space used: 556556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no504_o22.g1 MSMg01no504_o22.g1 CHROMAT_FILE:
MSMg01no504_o22.g1 PHD_FILE: MSMg01no504_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:43 2005
(245 letters)
>mm_chr10_54488457_54489101
Length = 645
Score = 466 bits (241), Expect = e-136
Identities = 244/245 (99%)
Strand = Plus / Plus
Query: 1 attagggggtctgagcttcaccacataagagatgctgaaggatttctgaagtagagctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attagggggtctgagcttcaccacataagagatgctgaaggatttctgaagtagagctat 260
Query: 61 tacattttgatatataaatctaatgtttctattagttgtaattttctttaaatagtctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacattttgatatataaatctaatgtttctattagttgtaattttctttaaatagtctcc 320
Query: 121 catttaattttctctcttctgcatgagcagtaattcaatgacaacttctgcaattcacac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 catttaattttctctcttctgcatgagcagtaattcaatgacaacttctgcagttcacac 380
Query: 181 aggtacatttaggcatgctgaggaatagagctgcctttggctcacagtataggcttccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtacatttaggcatgctgaggaatagagctgcctttggctcacagtataggcttccat 440
Query: 241 ccagg 245
|||||
Sbjct: 441 ccagg 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
