Query= MSMg01no505_c15.b1 MSMg01no505_c15.b1 CHROMAT_FILE:
MSMg01no505_c15.b1 PHD_FILE: MSMg01no505_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:00 2005
(450 letters)
>mm_chr10_21884705_21885556
Length = 852
Score = 793 bits (410), Expect = 0.0
Identities = 440/450 (97%), Gaps = 3/450 (0%)
Strand = Plus / Plus
Query: 1 actgtctccatagttagattgggagaaatgagtatctctttagaatatctacatttctat 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 actgtctccatagtcagattgggagaaatgagtatctctttagaatatctacatttctat 261
Query: 61 ttttatttgtttgtttgtttgtttattgtttttgcttgaggttttggtgttttatgacag 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 262 ttttatttgtttgtttgtttgtttattgtttt-gcttgaggttttggtgttttatgacag 320
Query: 121 agtctcaatgtgtagcccaggctgaactgaaattccactcttagatcgaggtatatttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtctcaatgtgtagcccaggctgaactgaaattccactcttagatcgaggtatatttaa 380
Query: 181 atgcatagagatcctctttcctctgtctcttcagtgctgggattagtagtgtggatattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcatagagatcctctttcctctgtctcttcagtgctgggattagtagtgtggatattt 440
Query: 241 acatttttttcagacatgttacagagggacaaggcagttgggtgataggagactggagca 300
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatttctgccagacatgttacagagggacaaggcagttgggtgataggagactggagca 500
Query: 301 ggtataggcaatgtgggaaagggatataaggggaagaggaaggagaccgtgagaggagtg 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 ggtataggcaatgtgggaaagggatataaggggaagaggaaggagaacgtgagaggagtg 560
Query: 361 tgtgcatggaggagtgcggccaggagttcagaggggaactggagaggaggggg-gg-gga 418
||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||
Sbjct: 561 tgtgcatggaggagtgcggccaggagttcagaggggaactggagaggagagggaggagga 620
Query: 419 gagttggtactgaggatggggaaagatggg 448
||||| ||||||||||||||||||||||||
Sbjct: 621 gagtttgtactgaggatggggaaagatggg 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 852
Length adjustment: 10
Effective length of query: 440
Effective length of database: 842
Effective search space: 370480
Effective search space used: 370480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_c15.g1 MSMg01no505_c15.g1 CHROMAT_FILE:
MSMg01no505_c15.g1 PHD_FILE: MSMg01no505_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:00 2005
(608 letters)
>mm_chr10_22237395_22238402
Length = 1008
Score = 1046 bits (541), Expect = 0.0
Identities = 591/608 (97%)
Strand = Plus / Minus
Query: 1 actatatagcctaactctagcaggactgagactcccagcaatcctcctgactctgtcttc 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 actatatagcctacctctagcaggactgagactcccagcaatcctcctgactctgtcttc 597
Query: 61 caagtgctaggattacaggtgtgagccaccgtaattcatttatgatacacttttaattaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 caagtgctaggattacaggtgtgagccaccgtaattcatttatgatacacttttaattaa 537
Query: 121 gttcactggcttcaaacctgagtgtctttgatggccataacaatatgaagggcccataaa 180
||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 536 gttcattggcttcaaacctgagtgcctttgatggccataacaatatgaagggcccataaa 477
Query: 181 agaacaataagaggcagagataatgtgttatacaggaaaggtcaattaggacacacaaat 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agaacaatcagaggcagagataatgtgttatacaggaaaggtcaattaggacacacaaat 417
Query: 241 caatttttctatttctctgtcaattgttcaaagcacaagatagcatttggcctgtaagtc 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 caattaagctatttctctgtcaattgttcaaagcacaagatagcatttggcctgtaagtc 357
Query: 301 atctaatagcgtttaggagatcagtaaagcggctaggtggtggtagcacacacctcaact 360
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 atctaacagcttttaggagatcagtaaagcggctaggtggtggtagcacacacctcaact 297
Query: 361 accaaggtcctcttctctatctgacttcttctgttcaatattatttctatgagactcatt 420
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 296 accaaggtcctcttctctatctgacttcttctgttcaatattatacctatgagactcatt 237
Query: 421 aatattgcacataataacatgatcttatctttttttaatttctgaatactaatgcaatgg 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 236 aatattgcacataataacatgatcttatcttttttaaatttctgaatactaatgcaatgg 177
Query: 481 atcttaatatcttaatttattcctccagtaggatatcaggagatattgctgtcatttcca 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 176 atcttaatatcttaatttattcctccagtaggatatcaggagatatcgctgtcatttcca 117
Query: 541 gtttaaaattcaagcttccctgaaggttctctttttgttcgtatatatggntagtcccag 600
|||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||
Sbjct: 116 gtttaaaattcaagcttccctgaaggttctctttttgttcatatgtatggttagtcccag 57
Query: 601 cactccaa 608
||| ||||
Sbjct: 56 cacaccaa 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
