Query= MSMg01no505_h20.b1 MSMg01no505_h20.b1 CHROMAT_FILE:
MSMg01no505_h20.b1 PHD_FILE: MSMg01no505_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:25 2005
(624 letters)
>mm_chr10_42344790_42345813
Length = 1024
Score = 1002 bits (518), Expect = 0.0
Identities = 599/644 (93%), Gaps = 29/644 (4%)
Strand = Plus / Plus
Query: 1 tactgtcttttgtctggtggtaacgtggctctcacccggcaaagcctggagctgtgtttg 60
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 201 tactgtcttttgtctggtggtaacgtggctctcacctggcaaggcctggagctgtgtttg 260
Query: 61 acccctcgtcctcagggatgccccacaaatctccaaggctcttcttgctttctacttcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccctcgtcctcagggatgccccacaaatctccaaggctcttcttgctttctacttcca 320
Query: 121 aggtcttccctagccctggggggggggga--------------------catgtcaaccc 160
|||||||||||||| |||| | |||||||||||
Sbjct: 321 aggtcttccctagctctgg---------aaaaaaaccaaaaaaacaaaacatgtcaaccc 371
Query: 161 tctgctcagctccctctaacctggggaggacatttctggtttctttggagactcagttgt 220
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tctgctcagctccctctaatctggggaggacatttctggtttctttggagactcagttgt 431
Query: 221 gtcatgtgatgttttcctggacactgtcttataagaggatgttttgctgaggcgaacatg 280
|||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 432 gtcatgtgatgtttgcctggaaactgtcttatgagaggatgttttgctgaggcgaacatg 491
Query: 281 tggtatttttctggaagatgtcagggagaagggcatgtgatgttttgctggagagaatgc 340
||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 492 tggtatttttctggaagctgtctgggaaaagggcatgtgatgttttgctggagagaatgc 551
Query: 341 ttgagagaacacgtgacatttgggacccaacagacaagggacaacactgtggcattgggt 400
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 552 ttgagagaacacgtgacatttggaacccaacagacaagggacaacactgtggcactgggt 611
Query: 401 cactttgttttctttgctgatcatcgttcgttgtgactttgtagagggaaatgcacctaa 460
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cactttgctttctttgctgatcatcgttcgttgtgactttgtagagggaaatgcacctaa 671
Query: 461 gaatttgtaatattctggtggcttcttgccacttctgcagagtcatgtgattgtcagagc 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaatttgtaatattctggtggcttcttgccacttctgcagagtcatgtgattgtcagagc 731
Query: 521 atcatggtttcttctggatcaaactgtcattgctgattcctgagtggagtttgtgagtgg 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atcatggtttcttctggatcaaactgtcattgctgattcctgagtggagtttgtgagtgg 791
Query: 581 atcaaactacccgctgccgattcatgtgcactgaactgctgatt 624
|||||||||| |||||| |||||||||| |||||||||||||||
Sbjct: 792 atcaaactactcgctgctgattcatgtggactgaactgctgatt 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_h20.g1 MSMg01no505_h20.g1 CHROMAT_FILE:
MSMg01no505_h20.g1 PHD_FILE: MSMg01no505_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:25 2005
(535 letters)
>mm_chr10_42500605_42501539
Length = 935
Score = 532 bits (275), Expect = e-155
Identities = 313/337 (92%), Gaps = 22/337 (6%)
Strand = Plus / Minus
Query: 210 acacctttaataccagcacttgggaggggaagg-----tttttattagacaggcagatct 264
||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 935 acacctttaataccagcacttgggaggggaaggcagac-----a-tagacaggcagatct 882
Query: 265 ctgtgaatctgaggccagcaacctagactacagagctagctcctgaacagtcagggctaa 324
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 881 ctgtgaatctgaggccagcaacctggactacagagctagctcctaaacagtcagggctaa 822
Query: 325 atagagaagctctgtctcaaaaaacaaaacaaaacaaacaaaaacaacaacaaacaccct 384
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 821 atagagaagctctgtctcaa-----aaaacaaaacaaacaaaaacaacaacaaacaccct 767
Query: 385 tacac------aaacaaaaacaaaaacaaaagccaccaggtaggaagttcattgccctat 438
||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tacacaaacaaaaacaaaaacaaaaacaaaagccaccaggtaggaagttcattgccctat 707
Query: 439 tactaactaaatagtgtaatagaagtatccacatgttacctagcaggagtatcaatgtaa 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tactaactaaatagtgtaatagaagtatccacatgttacctagcaggagtatcaatgtaa 647
Query: 499 tgaagaaggatccaaatagaagaagaggtggtaacag 535
|||||||||||||||||||||||||||||||||||||
Sbjct: 646 tgaagaaggatccaaatagaagaagaggtggtaacag 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
