Query= MSMg01no505_i02.b1 MSMg01no505_i02.b1 CHROMAT_FILE:
MSMg01no505_i02.b1 PHD_FILE: MSMg01no505_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:26 2005
(672 letters)
>mm_chr10_17281145_17282216
Length = 1072
Score = 1276 bits (660), Expect = 0.0
Identities = 666/668 (99%)
Strand = Plus / Plus
Query: 5 gaattcctcactattttcctgtgtctgaatttcctgtaaatgataaaactgtaaaacaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcactattttcctgtgtctgaatttcctgtaaatgataaaactgtaaaacaaa 264
Query: 65 gagtcataacatctggaccttcctgcttgggacttgatgaagataaattgagtactaaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagtcataacatctggaccttcctgcttgggacttgatgaagataaattgagtactaaca 324
Query: 125 ggaaaagacggaagagcccctgtgacagaggccaagctcattcaaaaggaagagcattca 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggaaaagacggaagagcccccgtgacagaggccaagctcattcaaaaggaagagcattca 384
Query: 185 tttgactgtgctcgtggcttacttaaaaaccaatgaagaggcaacgcgaagggcccctga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttgactgtgctcgtggcttacttaaaaaccaatgaagaggcaacgcgaagggcccctga 444
Query: 245 agccatcccggtactccctgctttctctcagctccagcctcagcagcctagaagtaactt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agccatcccggtactccctgctttctctcagctccagcctcagcagcctagaagtaactt 504
Query: 305 gcctctaaaaaccagtaaatcattactaaacattggtatttttatggcacctaaaagttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcctctaaaaaccagtaaatcattactaaacattggtatttttatggcacctaaaagttt 564
Query: 365 ggaatccccaggaccactctgatagaaccataaaattattttcattgctatttcataaat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggaatccccaggaccactctgatagaaccataaaattattttcattgctatttcataaat 624
Query: 425 gtagttttgctactattgtgaatcataatgtaaatctctgtcctgcaggatagctgatac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gtagttttgctactattgtgaatcataatgtaaatctctgtcctgcaggatagctgatac 684
Query: 485 aagactgccaaagggccaacctcgacccccaggctgagaccggatgaattcgctgctctt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aagactgccaaagggccaacctcgacccccaggctgagaccggatgaattcgctgctctt 744
Query: 545 tgtcctactttaaaagttaaacacaaatgcaggcctcctgtcttctgctatcagggctca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgtcctactttaaaagttaaacacaaatgcaggcctcctgtcttctgctatcagggctca 804
Query: 605 ctggggtagcagagagatggaacagattagaacctagtctgggttgtccttgttcaatga 664
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 805 ctggggtagcagagagatggaacagattagaacctagtctgggttgtccttgtccaatga 864
Query: 665 acaaacat 672
||||||||
Sbjct: 865 acaaacat 872
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_i02.g1 MSMg01no505_i02.g1 CHROMAT_FILE:
MSMg01no505_i02.g1 PHD_FILE: MSMg01no505_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:26 2005
(559 letters)
>mm_chr10_17427550_17428510
Length = 961
Score = 984 bits (509), Expect = 0.0
Identities = 549/563 (97%), Gaps = 6/563 (1%)
Strand = Plus / Minus
Query: 1 accccacctgaggctaagagaggtagtcggtgagcaagcaaacagaccagctacattttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 accccacctgaggctaagagaggtagtcggtgagcaagcaaacagaccagctacattttt 702
Query: 61 tcccaataaatctgcctgacagggaagtcaggaggcttcctgtgactatttaacattttt 120
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 701 tcccgataaatctgcctgacagggaagtcagaaggcttcctgtgactatttaacattttt 642
Query: 121 aaaaggcagtgggggtgaaatatgcctccagaccccacgtacaattccttagaacaagag 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 641 aaaaggcagtgggggtgaaatatgcctccagaccccatgtacaattccttagaacaagag 582
Query: 181 ttgttttgctggtttccaaaacccagga-aaagtgttac-cagtgtcttcagagttctgc 238
||||||||||||||||||||||||| || |||||||| | ||||||||||||| ||||||
Sbjct: 581 ttgttttgctggtttccaaaaccca-gagaaagtgtt-ctcagtgtcttcagacttctgc 524
Query: 239 atcctttttatcgtttcaaggacaggcctcggtagtcagcctcactcagacagaaaagag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atcctttttatcgtttcaaggacaggcctcggtagtcagcctcactcagacagaaaagag 464
Query: 299 gaatacattcctcccctccctcctctttccaactttgaaaagaacaactttcagaagatg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gaatacattcctcccctccctcctctttccaactttgaaaagaacaactttcagaagatg 404
Query: 359 tagtaagacataaaatgggggagacgagcctcacacctccgcggacaatgcgtttggtga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tagtaagacataaaatgggggagacgagcctcacacctccgcggacaatgcgtttggtga 344
Query: 419 atccaggagcaatgcaaatttctcttagcttcctggtggaggaagagagggggacaatgc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atccaggagcaatgcaaatttctcttagcttcctggtggaggaagagagggggacaatgc 284
Query: 479 tagagaagagttcaaaattaaaaaaaa--tctaagattttatgtgcgtgtgtgcgtgtgt 536
||||||||||||||| ||||||||||| |||||||||||||||| |||||||| ||||
Sbjct: 283 tagagaagagttcaacattaaaaaaaaaatctaagattttatgtgagtgtgtgcatgtgc 224
Query: 537 gtgtgatagctatcattagcaaa 559
|||||||||||||||||||||||
Sbjct: 223 gtgtgatagctatcattagcaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 961
Length adjustment: 10
Effective length of query: 549
Effective length of database: 951
Effective search space: 522099
Effective search space used: 522099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
