Query= MSMg01no505_j07.b1 MSMg01no505_j07.b1 CHROMAT_FILE:
MSMg01no505_j07.b1 PHD_FILE: MSMg01no505_j07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:31 2005
(663 letters)
>mm_chr10_56688424_56689486
Length = 1063
Score = 1106 bits (572), Expect = 0.0
Identities = 604/632 (95%), Gaps = 27/632 (4%)
Strand = Plus / Minus
Query: 1 gcagatggattacatttctctctcaatgtgcacaaattaaaaaattaaagagaaaaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcagatggattacatttctctctcaatgtgcacaaattaaaaaattaaagagaaaaagta 573
Query: 61 tttggtaagaaccagctttctattttgctggatcagaagcatttacggaaatggtttgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tttggtaagaaccagctttctattttgctggatcagaagcatttacggaaatggtttgaa 513
Query: 121 atgcttggctgaaacccagtgccaccaggcatgcctggctccagacaccaatcccattga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atgcttggctgaaacccagtgccaccaggcatgcctggctccagacaccaatcccattga 453
Query: 181 ctgaaaatttctattaagcaaacagatgggtgcatggtttgtagctgacctccccacaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctgaaaatttctattaagcaaacagatgggtgcatggtttgtagctgacctccccacaag 393
Query: 241 tgtggaacatgaaatgcaatattcctggaaggataaacactgtgtgcctcataattttac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tgtggaacatgaaatgcaatattcctggaaggataaacactgtgtgcctcataattttac 333
Query: 301 aaagaggggtagagatacattgccaggacatcttagaaataatattagctacaaaattag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 aaagaggggtagagatacattgccaggacatcttagaaataatattagctacaaaattag 273
Query: 361 attctaaagagattaactttatcagttattagagaaattgagaatgaaactcatagaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 attctaaagagattaactttatcagttattagagaaattgagaatgaaactcatagaaaa 213
Query: 421 agc---------------------------aaaaaaaaactagaaaaaaatgggaaagta 453
||| |||||||||| |||||||||||||||||||
Sbjct: 212 agcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaacgagaaaaaaatgggaaagta 153
Query: 454 aggggtgaattgcctaaagttctacaactgtgaataaaattattgagatgctttctgaaa 513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aggggtgaattgcctaaagttctacaactgtgaataaaattattgagatgctttctgaaa 93
Query: 514 taacatgataatttcacaaattgttaattaacaaaacccaaggtttgtttgtgtgccttt 573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 taacatgataatttcacaaattgttaattaacaaaacccaaggtttgtttgtgtgccttt 33
Query: 574 ttaaaatgaataaaatttactttaatagcagt 605
||||||||||||||||||||||||||||||||
Sbjct: 32 ttaaaatgaataaaatttactttaatagcagt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_j07.g1 MSMg01no505_j07.g1 CHROMAT_FILE:
MSMg01no505_j07.g1 PHD_FILE: MSMg01no505_j07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:31 2005
(617 letters)
>mm_chr10_56549854_56550870
Length = 1017
Score = 1139 bits (589), Expect = 0.0
Identities = 610/621 (98%), Gaps = 8/621 (1%)
Strand = Plus / Plus
Query: 1 atggggttaattgaatcttcttgtatctgttgaggattgttttgtgtctagttataaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atggggttaattgaatcttcttgtatctgttgaggattgttttgtgtctagttataaggt 260
Query: 61 caattttggagaaggtactctaagatgctgaagaaggtatattcttctgttttagggtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caattttggagaaggtactctaagatgctgaagaaggtatattcttctgttttagggtga 320
Query: 121 agtgttctatagatatctgttaaatccatttgtttcataacttctactagttttaactta 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 agtgttctatagatatctgttaaatccatttgttttataacttctactagttttaactta 380
Query: 181 tcttgctatctctgactgtatcctgcccctcctgtgagcccggttatgatggttatcctt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttgctatctctgactatatcctgcccctcctgtgagcccggttatgatggttatcctt 440
Query: 241 gagt----ttttttgtctctttgaatgtggttatgacagacctaggagtagagctgtctt 296
|||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtcagctt----gtctctttgaatgtggttatgacagacctaggagtagagctgtctt 496
Query: 297 tgggtgtgggcatggaggaggggggttggaacacctggtctacccctgagaaagcacagc 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgggtgtgggcatggaggaggggggttggaacacctggtctacccctgagaaagcacagc 556
Query: 357 tgtggactggaaggataaagtgtctctggcagggcagatgggtcctgcatctactgggcc 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 557 tgtggactggaaggataaagtgtctctggcagggcagatgggtcctgcatctactggacc 616
Query: 417 cagtaagggtcccagttaggccaggtattggtgcagggatgtctcacttgtgaacctggt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cagtaagggtcccagttaggccaggtattggtgcagggatgtctcacttgtgaacctggt 676
Query: 477 tgtgagagatgtctaggttgtcaagctgtttctggagcggggaggggatcactggctctg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tgtgagagatgtctaggttgtcaagctgtttctggagcggggaggggatcactggctctg 736
Query: 537 cctctttagactttcatatacaaatatcttcacttttaataatcttccatcctgaccctg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cctctttagactttcatatacaaatatcttcacttttaataatcttccatcctgaccctg 796
Query: 597 aagctcccaactgttgcttgc 617
|||||||||||||||||||||
Sbjct: 797 aagctcccaactgttgcttgc 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
