NAACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCAAGAGGATCCG
CGGAATTCAGTTTTATCCGAGAGTTGGGTTTTAAGCTAATTATCCCAAAT
TGAATTTGTTTCTATCAATATGATTTTTTTTTCTCCAAAAATATGCCTTG
TATTTTTTCTTTCTTTTTTTATTTTCTTTTTTTAAAATTAGATATTTTCT
TTATTTACATTTCAAATGCTATCCCAAAAGTTCCCTATACCCTCCCACCA
CCCTGCTCCCCTACCCACCCACTCCTACTTCTTGGCCCTGGCATTCCCCT
GTACTGGGGCATAGAAAGTTTGCTAGTCCTAGGGACCTCTCTTCCCAATG
ATGGCAGGCTAGGCCATCTTCTGCTACATATGCAGCTAGAGATATGAGCT
CTGGGGGTACTGGTTAGTTCATACTGTTGTTCCACCCATAGGGTTGCCAA
CCACATCAGCTCCTTGAGTACTTTCTCTAGGAGGTATATACACAAGGAAT
CTAGTGACATCTATTAAGGTTAGGTCTGGGTGCATTTCTCTTTACTATAC
ATTTAGGTGAGCAGGATACTTCCTTGAACTAAGCAGAATATGTTCAGAAA
TTATATTTGTGCTGGGATATTACCTTGTAGGAATAGCTTTCTGATTTACA
GAAGAGAGTAATTGACCAAAAGAATATAGGAACATAATCTCATANTTGTT
ACTATTATGATGATGTTGCATTTATATAAAATGTCATTCAACTGATGATA
TTTATTATN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTAAGCTCCAATTGACCAGCACCTACTGTCCCT
GCAAACCAAAGATCTTACTTCAGTGGTTCTGATATCTTGTTTTTAACAGC
TGATTCTTCAGCTCCAACTCACCAGAATCACAGATTTTTAACAAAAAATA
AAAAATGGCCCTGATAGTCATTAAAGGACTCTCAAACTTCCCTCTGCAAC
TTCTCAAGCTAGGCTGCCATCATCTGCATTGCTTTTAACATTCTTATCTT
TCAAGCTTCCTTTTTTCAGTTCACCAAGATTTGAACATTCAATGATTTTT
TTTTTCACCCCAAAGATCCAAAATCTTTTTGGATCTACAATTCTTCCCAA
AACAACATACATGGTCAGGTCTTTTACAGAAACACCTCACTCCTGCTAGC
TATTCTTGTTCTAGTTAGTGTTGCTATTGCTGTGATGAAACAGCATGACA
AAAGCAACATGGGAAGGACAGGAAGAGTTTATTTGCCTTATACTTCCATG
TCATAGTTCATCACTGAAAAAAGTCAGGGCAAGAAATCAAACAAGGTAGG
AAAATGAAGGTAGGAGATGATGAAGAGGCCATGGAGGAGTTCTACTTAAT
ATCTTGTTTCCCATGGATTTTCAGTCTGTTCTATTATAGAATGTAGGAGC
ACCAGCCCAAGGGTGACCATACCCACACTAAGGCCTCCCCCATCAATCAC
TAAGAN

Query= MSMg01no505_j16.b1 MSMg01no505_j16.b1 CHROMAT_FILE:
MSMg01no505_j16.b1 PHD_FILE: MSMg01no505_j16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:33 2005
         (575 letters)



>mm_chr10_36395784_36396757
          Length = 974

 Score = 1071 bits (554), Expect = 0.0
 Identities = 570/576 (98%), Gaps = 3/576 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgggttttaagctaattatcccaaattgaatttgtttctatcaatatgatttttttttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 201 tgggttttaagctaattatcccaaattgaatttgtttctatcaatatgattttttt--ct 258

                                                                       
Query: 61  ccaaaaatatgccttgtatttttt-ctttctttttttattttctttttttaaaattagat 119
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 259 ccaaaaatatgccttgtatttttttctttctttttttattttctttttttaaaattagat 318

                                                                       
Query: 120 attttctttatttacatttcaaatgctatcccaaaagttccctataccctcccaccaccc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 attttctttatttacatttcaaatgctatcccaaaagttccctataccctcccaccaccc 378

                                                                       
Query: 180 tgctcccctacccacccactcctacttcttggccctggcattcccctgtactggggcata 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgctcccctacccacccactcctacttcttggccctggcattcccctgtactggggcata 438

                                                                       
Query: 240 gaaagtttgctagtcctagggacctctcttcccaatgatggcaggctaggccatcttctg 299
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gaaagtttgcaagtcctagggacctctcttcccaatgatggcaggctaggccatcttctg 498

                                                                       
Query: 300 ctacatatgcagctagagatatgagctctgggggtactggttagttcatactgttgttcc 359
           ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctacatatgcagctagagacacgagctctgggggtactggttagttcatactgttgttcc 558

                                                                       
Query: 360 acccatagggttgccaaccacatcagctccttgagtactttctctaggaggtatatacac 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acccatagggttgccaaccacatcagctccttgagtactttctctaggaggtatatacac 618

                                                                       
Query: 420 aaggaatctagtgacatctattaaggttaggtctgggtgcatttctctttactatacatt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aaggaatctagtgacatctattaaggttaggtctgggtgcatttctctttactatacatt 678

                                                                       
Query: 480 taggtgagcaggatacttccttgaactaagcagaatatgttcagaaattatatttgtgct 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 taggtgagcaggatacttccttgaactaagcagaatatgttcagaaattatatttgtgct 738

                                               
Query: 540 gggatattaccttgtaggaatagctttctgatttac 575
           ||||||||||||||||||||||||||||||||||||
Sbjct: 739 gggatattaccttgtaggaatagctttctgatttac 774


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 974
Length adjustment: 10
Effective length of query: 565
Effective length of database: 964
Effective search space:   544660
Effective search space used:   544660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)