MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-506B02
Chromosome	10 (Build37)
Map Location	51,648,199 - 51,648,647
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Sim1, LOC268300, LOC100041768, Gp49a, Lilrb4, LOC669246, 9430073N08Rik, Gprc6a, Rfxdc1, 4933411G06Rik
Downstream gene	Vgll2, Ros1, Dcbld1, Gopc, LOC625811, EG668294, Nepn, D10Ertd438e, EG629689, Zfa, Slc35f1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sim1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20464 MGI:98306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC268300 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:268300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 356 ESTs, 12 Proteins pseudo : _no_value

name	LOC100041768 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Gp49a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14727 MGI:102702
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lilrb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14728 MGI:102701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC669246 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669246
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	9430073N08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77296 MGI:1924546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein

name	Gprc6a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210198 MGI:2429498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rfxdc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320995 MGI:2445208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933411G06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71090 MGI:1918340
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins

name	Vgll2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215031 MGI:2447460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ros1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19886 MGI:97999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dcbld1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66686 MGI:1913936
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gopc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94221 MGI:2149946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625811 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 117 ESTs, 8 Proteins pseudo : _no_value

name	EG668294 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668294 MGI:3645086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins pseudo : _no_value

name	Nepn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66650 MGI:1913900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D10Ertd438e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52014 MGI:1196365
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG629689 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629689 MGI:3644596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Zfa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22639 MGI:99153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35f1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215085 MGI:2139810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sim1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361519 GeneID:20464 MGI:98306
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : single-minded homolog 1 (Drosophila) transcript_id : NM_011376.2

name	Gp49a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680052 GeneID:14727 MGI:102702
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein 49 A transcript_id : NM_008147.1

name	Lilrb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129909 GeneID:14728 MGI:102701
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leukocyte immunoglobulin-like receptor, subfamily B, member 4 transcript_id : NM_013532.2

name	9430073N08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260731 GeneID:77296 MGI:1924546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 1 Protein product : RIKEN cDNA 9430073N08 gene transcript_id : XM_125627.6

name	Gprc6a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23346474 GeneID:210198 MGI:2429498
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor, family C, group 6, member A transcript_id : NM_153071.1

name	Rfxdc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348304 GeneID:320995 MGI:2445208
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulatory factor X domain containing 1 transcript_id : NM_177306.3

name	4933411G06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388071 GeneID:71090 MGI:1918340
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 2 Proteins product : RIKEN cDNA 4933411G06 gene transcript_id : XM_621219.3

name	Vgll2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418890 GeneID:215031 MGI:2447460
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vestigial like 2 homolog (Drosophila) transcript_id : NM_153786.1

name	Ros1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326509 GeneID:19886 MGI:97999
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Ros1 proto-oncogene transcript_id : NM_011282.2

name	Dcbld1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371872 GeneID:66686 MGI:1913936
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : discoidin, CUB and LCCL domain containing 1 transcript_id : NM_025705.2

name	Gopc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543484 GeneID:94221 MGI:2149946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : golgi associated PDZ and coiled-coil motif containing transcript_id : NM_053187.2

name	Nepn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142359018 GeneID:66650 MGI:1913900
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephrocan transcript_id : NM_025684.2

name	D10Ertd438e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13384839 GeneID:52014 MGI:1196365
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 10, ERATO Doi 438, expressed transcript_id : NM_030250.1

name	EG629689 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82932618 GeneID:629689 MGI:3644596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG629689 transcript_id : XM_894604.1

name	Zfa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930732 GeneID:22639 MGI:99153
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein, autosomal transcript_id : NM_009540.3

name	Slc35f1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254331 GeneID:215085 MGI:2139810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member F1 transcript_id : NM_178675.3

name	Sim1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106403 GeneID:20464 MGI:98306
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IDA]; GO:0000155 - two-component sensor activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : single-minded 1 product : single-minded homolog 1 protein_id : NP_035506.1

name	Gp49a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680053 CCDS:CCDS23831.1 GeneID:14727 MGI:102702
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : glycoprotein 49 A protein_id : NP_032173.1

name	Lilrb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305097 CCDS:CCDS23832.1 GeneID:14728 MGI:102701
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : glycoprotein 49 B product : leukocyte immunoglobulin-like receptor, subfamily B, member 4 protein_id : NP_038560.1

name	9430073N08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51765612 GeneID:77296 MGI:1924546
definition	codon_start : 1 product : hypothetical protein LOC77296 protein_id : XP_125627.3

name	Gprc6a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23346475 CCDS:CCDS23834.1 GeneID:210198 MGI:2429498
definition	GO_component : GO:0009986 - cell surface [Evidence IDA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0019722 - calcium-mediated signaling [Evidence IDA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : odorant receptor 5.24-like; G protein-coupled receptor family C group 6 member A product : G protein-coupled receptor, family C, group 6, member A protein_id : NP_694711.1

name	Rfxdc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893413 CCDS:CCDS23835.1 GeneID:320995 MGI:2445208
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : regulatory factor X domain containing 1 protein_id : NP_796280.1

name	4933411G06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63601676 GeneID:71090 MGI:1918340
definition	codon_start : 1 product : hypothetical protein LOC71090 protein_id : XP_621219.1

name	Vgll2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418891 CCDS:CCDS23837.1 GeneID:215031 MGI:2447460
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007519 - striated muscle development [Evidence IDA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : vestigial like 2 homolog protein_id : NP_722481.1

name	Ros1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326510 CCDS:CCDS23838.1 GeneID:19886 MGI:97999
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : Ros1 proto-oncogene protein_id : NP_035412.2

name	Dcbld1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385162 CCDS:CCDS23839.1 GeneID:66686 MGI:1913936
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : discoidin, CUB and LCCL domain containing 1 protein_id : NP_079981.1

name	Gopc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543485 GeneID:94221 MGI:2149946
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0042980 - cystic fibrosis transmembrane conductance regulator binding [Evidence ISS]; GO:0005478 - intracellular transporter activity [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0005083 - small GTPase regulator activity [Evidence IDA]; GO:0050430 - syntaxin-6 binding [Evidence ISS] GO_process : GO:0006914 - autophagy [Evidence IDA]; GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence ISS]; GO:0006893 - Golgi to plasma membrane transport [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : PDZ domain-containing protein PIST; PDZ protein interacting specifically with TC10 product : golgi associated PDZ and coiled-coil motif containing protein_id : NP_444417.2

name	Nepn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385148 CCDS:CCDS23840.1 GeneID:66650 MGI:1913900
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : nephrocan protein_id : NP_079960.1

name	D10Ertd438e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384840 CCDS:CCDS23841.1 GeneID:52014 MGI:1196365
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC52014 protein_id : NP_084526.1

name	EG629689 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82932619 GeneID:629689 MGI:3644596
definition	codon_start : 1 product : hypothetical protein protein_id : XP_899697.1

name	Zfa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930733 CCDS:CCDS23842.1 GeneID:22639 MGI:99153
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : zinc finger protein ZFX; autosomal zinc finger protein product : zinc finger autosomal protein protein_id : NP_033566.3

name	Slc35f1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254332 CCDS:CCDS23843.1 GeneID:215085 MGI:2139810
definition	codon_start : 1 note : DUF6 containing protein product : solute carrier family 35, member F1 protein_id : NP_848790.2

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 1 pseudo : _no_value

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 2 pseudo : _no_value

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 3 pseudo : _no_value

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 4 pseudo : _no_value

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 5 pseudo : _no_value

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 6 pseudo : _no_value

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 7 pseudo : _no_value

name	LOC100041768 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041768
definition	number : 8 pseudo : _no_value

name	LOC669246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669246
definition	number : 1 pseudo : _no_value

name	LOC669246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669246
definition	number : 2 pseudo : _no_value

name	LOC669246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669246
definition	number : 3 pseudo : _no_value

name	LOC669246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669246
definition	number : 4 pseudo : _no_value

name	LOC669246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669246
definition	number : 5 pseudo : _no_value

name	LOC669246 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669246
definition	number : 6 pseudo : _no_value

name	LOC268300 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260759 GeneID:268300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 356 ESTs, 12 Proteins product : similar to ribosomal protein L7a pseudo : _no_value transcript_id : XR_033530.1

name	LOC625811 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260760 GeneID:625811
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 117 ESTs, 8 Proteins product : similar to EWS pseudo : _no_value transcript_id : XR_033621.1

name	EG668294 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260761 GeneID:668294 MGI:3645086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins product : predicted gene, EG668294 pseudo : _no_value transcript_id : XR_033626.1

clone name	MSMg01-401H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541B01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487C08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-129H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-185E15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-344M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122F13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-236F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162O06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-506B02.T7 (MSMg01no506_b02.b1)	MSMg01-506B02.TJ (MSMg01no506_b02.g1)
ACC	AG580551	AG580552
length	831	732
length of high quality (start - end)	176 (59 - 234)	449 (89 - 537)
definition	CHROMAT_FILE: MSMg01no506_b02.b1 PHD_FILE: MSMg01no506_b02.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:34:08 2005	CHROMAT_FILE: MSMg01no506_b02.g1 PHD_FILE: MSMg01no506_b02.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:34:08 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GTCCCCGCTATACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXCGCGGAATTCAGGTTATTTATCCTTGGCAACAATTAAGTAGA ACTGATGATCCATCTTGTTGTCCCATCATCGTGGCTCATTTCAAACCTAT ACAACAGTGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTA GTAGTAATAGTAGTAGTAATAGTAATAGTAATAACGTTTCCTTTTCGTGT TGGTCTGTTCCGTCTCTATTTTTCCCGCCCCGGTTGTTATTGCTTGTTGC CGCTGGCGTACCGTGATATTTTATTATCCTTACTTGCTTTTTTTTTTTTT TGTTCGTTAGTCTGCGCTACCTTTCTTCTTTCTTCCTTGCCGCGTATTGT TTGCTGTTGTCTTTCTTTGCGTTTTTTTTCCTTGTCCTTATCCTTACCTC GCCTTTTTTTTTTGGTTTTGTGCTGTTTTTCTTTTCGTCTATTTTTAGCT TTGTTCTCTCTCTCTCTCCTTTCGTCTTTTCCTCTTCCTTTCTATTTCTT CTTCTTACGCTTTGTTTTGTCGCTCCTTTTTCGTTTTATCTTCTGTTCTG TCTTCTTGTTAGTCCCTATGTGTGTATTACCTGTTGCCCACCGGGGTTTT GTGGTGTTCCTGTTTCCTATCCTTTTCCATTGATCCCTTCTTCCTCCCTT TTTTGTCTTATTCTTGTGTTCGTAACTCTGTTTTATTCTTCGCTGGTGTT TTCTTATGTTTACCCCAGTGTTGTTATTTCCCTTCTTTCGCTTTCTTTTC TATTCTTTTCCTTGTTCCTTCCCCTGTCTTG	TTCTTTTTCTTACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCACTTACCT GGTGGTCATCTGGAATATGAGGGCAGGTTGGGCTCTGTTTCATATGTCCT ATCCTTTATCAAAGGGTTTTGAGCAGGCTTTTGAGGAAAGTATAGGAAAC TAGAATCAAAAGTTTACAAAGTCTCTGTTTATATGCAATTTTCTGCCTCT CCATTGCCTGGTGCTACTCAAACAGCAAATTCTAAAGTCAATATGGGAAA CTACAAACAAGTGTGGACATGGAAAACTGTCCATGCAGACAAGTCTTTCA CAGTGGCTAGAAGCATACATCTGGAAATAACGCCTTTGCTAAAGTTAAAA TATTTTGCTCTCAGTCCAGTGAGGAAACATGAAAGTAAATTTCAGGATTA TGTGAAATATTTGGTAATCGTCTAAGAGACTTATTCTATTCTTTATGCTT CTTCAAGCTTATTAGGTGTTCCTCTTCACGTGGAAGCAGCTTATTTAAAC ATCAGTATTAAGATGCACAGGCTTCTATCTTATATTTTCCTTGAACATAA TATATAGCAAGTCTTGACATTTTTAGTTTTTCTTGAGAAGGAGTTAGAAT GAGGATTATGAATTCCTGGGGTTCTTTTCTGTACTTATAACACATGTTTT TTATGGCCCCATGGTTTACGCCTGACCTGAAN
quality values	Open. Hide. 8 8 8 19 13 11 11 11 8 8 8 7 6 8 8 8 8 8 13 17 19 28 30 37 37 33 33 30 37 37 37 30 29 41 37 37 37 41 30 28 24 20 20 19 21 9 9 9 10 10 10 19 19 22 26 30 21 22 24 39 44 39 35 35 30 30 31 31 33 33 33 47 21 25 10 8 8 8 8 10 15 19 32 30 33 33 33 37 36 36 36 39 43 57 57 57 57 59 59 59 59 57 50 53 53 53 53 54 42 42 36 36 41 42 57 57 59 68 57 57 57 54 54 54 54 54 54 54 54 57 54 59 59 59 57 57 57 57 57 57 57 47 47 57 57 47 47 48 59 57 54 54 54 54 54 54 59 57 59 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 68 68 59 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 54 54 50 57 57 57 57 57 59 57 57 59 59 59 57 57 57 48 48 34 34 23 23 18 22 23 11 11 11 11 13 14 13 13 12 13 13 10 10 8 15 15 10 10 8 10 8 8 8 8 13 8 8 10 8 8 8 9 9 9 9 10 16 10 10 11 9 8 8 10 10 8 8 8 8 6 6 8 8 10 9 10 8 8 8 8 8 10 11 8 8 8 8 8 8 8 8 10 10 10 11 8 8 8 8 8 8 8 8 8 8 10 10 10 9 8 8 8 6 8 8 9 8 8 6 6 8 8 9 10 10 15 13 12 12 16 13 10 13 16 19 14 10 10 8 8 8 6 6 8 6 6 8 8 8 8 8 6 6 8 8 10 9 12 12 15 12 11 13 11 9 9 9 12 9 10 9 9 9 9 9 9 10 12 12 8 8 8 8 8 8 10 11 12 11 8 8 8 6 8 7 7 10 10 12 13 11 12 11 11 11 10 10 6 6 12 10 12 13 14 18 11 10 8 10 6 7 6 8 8 8 6 7 8 8 9 9 9 9 9 13 13 12 12 12 10 13 10 10 9 12 12 12 13 12 10 12 12 11 11 8 10 11 10 10 8 8 8 10 16 15 10 10 8 8 8 8 8 8 11 17 13 11 10 10 10 10 10 6 6 8 8 13 12 10 15 10 9 11 15 13 13 10 8 8 8 8 8 10 8 8 8 9 9 9 11 8 8 8 8 8 9 10 10 10 10 10 10 10 10 10 12 16 12 14 11 9 9 10 10 8 8 8 8 10 12 13 10 9 9 8 8 8 8 9 8 8 8 11 13 10 10 8 8 8 9 8 8 7 7 8 12 13 15 13 8 8 8 8 9 10 10 10 12 11 10 10 10 8 10 12 8 8 8 8 11 13 11 10 10 9 9 9 9 10 10 15 10 9 8 8 8 8 8 12 8 7 6 8 10 10 10 9 11 11 10 10 10 10 10 10 10 8 8 8 8 8 8 8 10 10 10 8 8 8 8 10 10 10 9 9 17 10 13 6 7 12 8 8 8 8 9 8 8 8 10 12 12 10 9 9 8 8 8 8 8 8 10 9 10 9 9 9 9 8 8 9 12 13 8 12 14 11 10 8 8 8 8 11 13 10 8 8 8 11 10 8 8 8 10 10 8 8 10 10 8 6 6 6 10 8 10 10 9 9 11 12 10 10 15 13 14 9 9 8 8 6 6 8 8 11 12 10 15 10 11 13 8 7 7 8 10 11 8 8 8 8 11 10 9 10 8 8 6 9 6 10 9 9 9 12 12 10 8 8 10 8 8 8 13 12 6 6 6 8 9 9 10 13 14 16 10 8 8 8 8 8 10 14 19 17 9 9 9 8 8 8 8 8 8 10 15 10 11 10 16 9 10 9 9 8 8 8 8	Open. Hide. 9 9 9 12 8 8 11 10 14 10 9 9 9 12 11 12 9 9 9 9 14 14 33 23 25 24 25 20 22 25 31 39 37 37 37 37 41 41 40 41 30 28 22 9 9 9 9 9 11 10 9 10 10 10 21 19 28 28 30 37 37 36 36 36 36 44 44 59 50 42 37 25 23 10 9 11 9 11 11 12 16 22 22 37 37 37 42 48 48 47 47 47 50 50 53 59 59 48 48 43 59 59 59 59 50 48 48 48 48 50 57 59 53 68 68 68 68 68 54 54 57 57 59 59 59 68 68 59 59 54 54 54 54 54 57 57 57 59 57 57 57 57 57 57 68 68 68 68 68 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 43 43 39 43 43 52 52 59 59 57 57 52 52 52 52 57 57 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 68 68 57 57 57 57 52 52 59 59 59 57 57 57 59 59 59 59 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 57 57 57 62 62 62 62 54 52 62 62 62 62 62 62 62 62 62 43 35 35 43 43 62 62 62 52 52 52 62 62 62 62 62 52 52 52 62 52 52 52 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 62 62 68 62 62 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 52 52 52 43 38 32 15 13 12 12 11 11 12 26 34 43 52 59 59 59 57 57 57 57 57 68 68 57 57 57 57 57 59 52 52 52 59 57 57 57 52 57 43 57 52 52 52 57 57 57 52 52 52 52 52 52 57 57 57 57 57 57 52 52 52 52 52 52 52 52 54 59 59 68 57 57 57 52 52 52 50 43 43 27 29 32 43 43 52 52 48 57 50 50 54 54 50 50 48 57 43 50 41 35 35 42 42 44 46 47 48 48 43 43 43 43 43 43 44 44 44 42 35 35 44 37 36 25 25 25 36 36 57 42 39 35 28 36 36 35 35 41 41 30 30 18 36 23 33 31 42 42 34 43 43 43 44 57 44 42 33 32 30 33 33 39 39 39 30 30 25 25 16 18 16 16 20 21 32 37 40 39 34 34 25 18 22 26 19 25 30 24 22 19 22 18 26 26 37 37 34 33 24 15 22 11 11 11 15 18 19 20 23 12 12 13 25 25 26 28 14 13 11 8 8 10 12 15 17 28 28 37 35 35 34 34 23 23 19 23 11 11 9 10 11 17 14 15 15 13 12 12 11 11 10 20 16 18 15 15 14 23 16 17 12 11 11 17 15 14 10 10 10 10 23 19 15 12 12 15 15 18 21 18 19 11 10 9 9 10 15 19 20 24 33 30 35 39 27 17 10 8 8 8 10 21 13 10 11 11 9 9 9 9 9 19 16 13 13 10 10 10 10 9 8 10 15 8 8 8 10 10 10 8 8 8 8 8 11 8 9 8 8 8 8 23 19 10 10 10 15 12 8 8 8 8 8 8 9 10 13 8 8 8 8 8 8 13 22 33 22 21 10 10 10 8 8 8 8 10 8 8 8 8 8 10 8 8 8 8 8 8 8 8 13 15 19 18 22 10 10 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no506_b02.g1 MSMg01no506_b02.g1 CHROMAT_FILE:
MSMg01no506_b02.g1 PHD_FILE: MSMg01no506_b02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:34:08 2005
         (449 letters)



>mm_chr10_51647999_51648847
          Length = 849

 Score =  822 bits (425), Expect = 0.0
 Identities = 443/449 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttcacttacctggtggtcatctggaatatgagggcaggttgggctctgtttcatatgtc 60
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tttcacttacctgttggtcatctggaatatgagggcaggttgggctctgtttcatatgtc 590

                                                                       
Query: 61  ctatcctttatcaaagggttttgagcaggcttttgaggaaagtataggaaactagaatca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ctatcctttatcaaagggttttgagcaggcttttgaggaaagtataggaaactagaatca 530

                                                                       
Query: 121 aaagtttacaaagtctctgtttatatgcaattttctgcctctccattgcctggtgctact 180
            |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 529 gaagtttccaaagtctctgcttatatgcagttttctgcctctccattgcctggtgctact 470

                                                                       
Query: 181 caaacagcaaattctaaagtcaatatgggaaactacaaacaagtgtggacatggaaaact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caaacagcaaattctaaagtcaatatgggaaactacaaacaagtgtggacatggaaaact 410

                                                                       
Query: 241 gtccatgcagacaagtctttcacagtggctagaagcatacatctggaaataacgcctttg 300
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 409 gtccatgcagacaagtctttcacagtgactagaagcatacatctggaaataacgcctttg 350

                                                                       
Query: 301 ctaaagttaaaatattttgctctcagtccagtgaggaaacatgaaagtaaatttcaggat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ctaaagttaaaatattttgctctcagtccagtgaggaaacatgaaagtaaatttcaggat 290

                                                                       
Query: 361 tatgtgaaatatttggtaatcgtctaagagacttattctattctttatgcttcttcaagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tatgtgaaatatttggtaatcgtctaagagacttattctattctttatgcttcttcaagc 230

                                        
Query: 421 ttattaggtgttcctcttcacgtggaagc 449
           |||||||||||||||||||||||||||||
Sbjct: 229 ttattaggtgttcctcttcacgtggaagc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space:   368321
Effective search space used:   368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information