Query= MSMg01no507_i15.b1 MSMg01no507_i15.b1 CHROMAT_FILE:
MSMg01no507_i15.b1 PHD_FILE: MSMg01no507_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:07 2005
(628 letters)
>mm_chr10_112585259_112586286
Length = 1028
Score = 1170 bits (605), Expect = 0.0
Identities = 622/633 (98%), Gaps = 11/633 (1%)
Strand = Plus / Plus
Query: 1 catttttaatggggttatttgattttctggagtccaccttcttgagttctttatatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 catttttaatggggttatttgattttctggagtccaccttcttgagttctttatatatat 261
Query: 61 tggatattagtcccctatctgatttaggataggtaaagatcctttcctaatctgttggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggatattagtcccctatctgatttaggataggtaaagatcctttcctaatctgttggtg 321
Query: 121 gcctttttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttcatgat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcctttttt-gtcttattgacggtgtcttttgccttgcagaagctttgcagtttcatgat 380
Query: 181 gtcccatttgtcacttctcgatcttacagcaaaggagattaaaaatcaacaaaagtttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcccatttgtcacttctcgatcttacagcaaaggagattaaaaatcaacaaaagtttaa 440
Query: 241 atcccttcc-----tttttttagtgctcagaacttccccatacctggctacctcaaggca 295
||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcccttccaaaaatt-----agtgctcagaacttccccatacctggctacctcaaggca 495
Query: 296 aattggcacttctcaaacttaatattggttttaacaccatcaattctttgcttctccaca 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aattggcacttctcaaacttaatattggttttaacaccatcaattctttgcttctccaca 555
Query: 356 gccacaaagttctctgtggctctttgggatttgccccaaatttcactatggagtggtgat 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gccacaaagttctctgtggctctttgggatttgccccaaatttcactatggagtggtgat 615
Query: 416 ctgaatctttaataattctctatgactttgattctcttgtgggataaaaagcatgatttt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ctgaatctttaataattctctatgactttgattctcttgtgggataaaaagcatgatttt 675
Query: 476 gtttcgtatgtttgacttcgtatacttttcaaagaataggaatgagactcccaagttctt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gtttcgtatgtttgacttcgtatacttttcaaagaataggaatgagactcccaagttctt 735
Query: 536 tccacatcaaaggcgaacgctccagttgctacagacatgtcagtggtggttagacaatgg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tccacatcaaaggcgaacgctccagttgctacagacatgtcagtggtggttagacaatgg 795
Query: 596 tagaaaatatcatgattaaaatctatgtttaac 628
|||||||||||||||||||||||||||||||||
Sbjct: 796 tagaaaatatcatgattaaaatctatgtttaac 828
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_i15.g1 MSMg01no507_i15.g1 CHROMAT_FILE:
MSMg01no507_i15.g1 PHD_FILE: MSMg01no507_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:07 2005
(182 letters)
>mm_chr10_112719872_112720453
Length = 582
Score = 284 bits (147), Expect = 2e-81
Identities = 156/161 (96%), Gaps = 4/161 (2%)
Strand = Plus / Minus
Query: 1 agaggagttgtgacacaatgtgacaaaacccttggaaattcatgttagaccaaatctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 agaggagttgtgacacaatgtgacaaaacccttggaaattcatgttagaccaaatctcag 247
Query: 61 tatggagaggatagttggccttgtaatcctaccctagctgtgattt----tgtgtgtgtg 116
||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct: 246 tatggagaggatagttggccttgtaatcctaccctagttgtgattttgtgtgtgtgtgtg 187
Query: 117 tgtgtgtgtgtgtgtgtgtgtgtgtggttatttgattctga 157
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 tgtgtgtgtgtgtgtgtgtgtgtgtggttatttgattctga 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
