Query= MSMg01no507_o18.b1 MSMg01no507_o18.b1 CHROMAT_FILE:
MSMg01no507_o18.b1 PHD_FILE: MSMg01no507_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:38 2005
(652 letters)
>mm_chr10_33300006_33301057
Length = 1052
Score = 1069 bits (553), Expect = 0.0
Identities = 556/557 (99%)
Strand = Plus / Minus
Query: 96 acgcagaagagcatgaagcacaagagaattgtttcattgcttttaaaattttttgatgag 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 acgcagaagagcatgaagcacaagagaattgtttcattgcttttaaaattttttgatgag 993
Query: 156 ggtctcacttaacccaggctagcctcaagcttgtactatagccaagagtgacttttgctc 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 992 ggtctcacttaacccaggctagcctcaagcttgtactatagccaagagtgacttttgctc 933
Query: 216 ctcctgtttccatgtcctctgtgttggagttgaaagatttacataatcatgccaagtttt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ctcctgtttccatgtcctctgtgttggagttgaaagatttacataatcatgccaagtttt 873
Query: 276 tctgattttggagactcaactttttgccctgtatatgccaaagagactctatacaatcta 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 tctgattttggagactcaactttttgccctgtatatgccaaagagactctatacaatcta 813
Query: 336 atggatacctccatttttatatagattcactgccatttcagatcaaagtacactggaata 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 atggatacctccatttttatatagattcactgccatttcagatcaaagtacactggaata 753
Query: 396 agggagttacaaggccaattcaagggcaattgaacatgggagccaaagtaacattcatat 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 agggagttacaaggccaattcaagggcaattgaacatgggagccaaagtaacattcatat 693
Query: 456 cttgggacataaatcaccttaatcttccatcgatatttagacttggaacttataggaaca 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cttgggacataaatcaccttaatcttccatcgatatttagacttggaacttataggaaca 633
Query: 516 agaaaattgtaagaaagtgggctgggggtatctgaaagttgactcatggtatgtggtatg 575
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 632 agaaaattgtaagaaagtgggctgggggtatctgaaagttgactcatgttatgtggtatg 573
Query: 576 ttcacttgatcttggagctcatctcacgtaactttagtgaaagctgagttgtgcacaaca 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttcacttgatcttggagctcatctcacgtaactttagtgaaagctgagttgtgcacaaca 513
Query: 636 ttcttcttttcgaaatt 652
|||||||||||||||||
Sbjct: 512 ttcttcttttcgaaatt 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_o18.g1 MSMg01no507_o18.g1 CHROMAT_FILE:
MSMg01no507_o18.g1 PHD_FILE: MSMg01no507_o18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:38 2005
(654 letters)
>mm_chr10_33163397_33164450
Length = 1054
Score = 1189 bits (615), Expect = 0.0
Identities = 644/657 (98%), Gaps = 8/657 (1%)
Strand = Plus / Plus
Query: 1 aatattaatggattcccagaaagaacaatgactgaaattgtgcatatgaagagaaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatattaatggattcccagaaagaacaatgactgaaattgtgcatatgaagagaaaacca 260
Query: 61 agaaattcaatactaccaagttctatatctgttctatgggaacctgttggaaaatagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaattcaatactaccaagttctatatctgttctatgggaacctgttggaaaatagttt 320
Query: 121 aaagatttatgaaatattcccctattacttattttaatatacattcatttttttcaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagatttatgaaatattcccctattacttattttaatatacattcatttttttcaattt 380
Query: 181 taactctaagagaaaaatagaagttatagatttaacatgctaaatattaggagaaacttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 taactctaagagaaaaatagaagttatagatttaacatgctaaatattaggagaaa-ttt 439
Query: 241 tt-cttatcttttttcttttttagataagcctaaaccatcttcaagtgagtatattactt 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttacttatcttttttcttttttagataagcctaaaccatcttcaagtgagtatattactt 499
Query: 300 agaacttttaggatatgagctaatgagatggctcccacaccaaatgtacttgctgcatca 359
||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||
Sbjct: 500 agaacttttaggatatgagctaatgagatggctcctagagtaaatgtacttgctgcatca 559
Query: 360 ggccttgtgacgtgagttgaatcccatggacccagttaaaaatggacagaaaatactgag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggccttgtgacgtgagttgaatcccatggacccagttaaaaatggacagaaaatactgag 619
Query: 420 ttcacaatgttgttctctgatctttattcaagtgcacataattatgcacacaaccacaca 479
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcacaatgttgtcctctgatctttattcaagtgcacataattatgcacacaaccacaca 679
Query: 480 tacacacacacacacacacacacacacacacacac------cattcacacattcctaggt 533
||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 680 tacacacacacacacacacacacacacacacacacacacaccattcacacattcctaggt 739
Query: 534 aataatttttaaaaagaatattttattatgagattttgaatttacaatgtgcataagtgg 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aataatttttaaaaagaatattttattatgagattttgaatttacaatgtgcataagtgg 799
Query: 594 taaattaaatttcaaaaataggcttattaatataaagaccattatactattatggaa 650
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 taaattaaatttcaaaaataggcttattaatataaagaccattatactattatggaa 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1054
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1044
Effective search space: 672336
Effective search space used: 672336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
