XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TTTCCTTTTTGACTATGCTATACTCCGGGTTTTAACTGGTTTGTCCTTAA
TTTTGTTCCATCCAAACTCTCTGAGATCTAAAGTGTGTGCCTTTCCCTTT
CTGGTTATTGAACACCCCTTAAAGCCGAATAAAGTACCTTTTTTGTAACC
TTACTGACATGTTTTTTAAAAAACACGCCTATGGGGATATCTACCAATAT
GTGAATGTTGGAATCACACAAATTTACTTTAGAGGCCTTAATGANAAAAA
AAATTATAAACCCCCCCCACCTTTTTTAAACCCAACCCCCCAACCCCCCC
ACCAAATTTACCCGCCCAAAAANCCCCCTTTTGAAAAAATTCAGGTACCA
AAAGTTTTTTGGNNNNNNNNNNNNTCCAATGAAGAGGTGAGGGAGGGGGG
GGGGAGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNANNNNNNNANNNNNNNNNNN
CNNNNNNAANNTNANAAAAATTGAANNNACCAANNNNNNNNNNNNNNNNA
NNNNNNAAANAANANAAANNNANAAANNNNNNANAANAAAAANAAAAAAA
ATTTTATTTGTTTTG

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGGGGGTAGTGAAACACAC
ACACAGACACACAGACACAGACACAGACACAGACACAGACACAGACACAG
ACACAGACACAGACACAGACACACACACACACACACACACACACACACAG
AGGCATGTCTGCCTGGCAAAGGAGGGGCTGTGAGAGAGCAAGGGGGGAGG
GGCGAGAAGGAAGCAGAGAGGAGGGCTGGCCTTTAGTTTTAGTTTAATTT
GTTTGTGACTAGAAGCTAGCTGTGAGACCTTGAACAGCTTAGCATTCTCT
CATAAATTTTTAGACACCTATTAAATGAGACTAATGGTGAATGTTTCTGT
CTCCTTAATCATAGAGGTTTGGGAGGATCAAATGAGCCTTAATTCAATAC
ATTAAACTCCTACTGTGTGTATTAGACTTAACATATATTAATTATATATA
TATATAATTCTCTGTTATATATTATACATTATATATTATACATATATTTT
CTTATATATACTAATAATATACAAATATATACTTATTCTCTTATATATTT
TATTAAATATAACAAATAATATATTATGTATATTATAATATATCATAGTA
TATAGTTATAATATAAAATATCTTATATAATATTAGCACAATATATTAGA
ATGTATTATAATATATTATGTAATAATAAATTAATATGTGATATATTAAG
ATAAGGTATATAA

Query= MSMg01no508_d03.g1 MSMg01no508_d03.g1 CHROMAT_FILE:
MSMg01no508_d03.g1 PHD_FILE: MSMg01no508_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:01 2005
         (653 letters)



>mm_chr10_111437550_111438602
          Length = 1053

 Score = 1118 bits (578), Expect = 0.0
 Identities = 633/658 (96%), Gaps = 17/658 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagggggtagtgaaacacacacacagacacacagacacagacacagacacagacacaga 60
           ||||||||||||||||||||||||  ||||||||||||||    |||||||| |||||||
Sbjct: 211 aaagggggtagtgaaacacacaca--gacacacagacaca----cagacacacacacaga 264

                                                                       
Query: 61  cacagacacagacacagacacagacacagacacacacacacacacacacacacacacaca 120
           |||| |||||  ||||||||||||||||  ||||| | | ||||||||||||||||||||
Sbjct: 265 cacacacaca--cacagacacagacaca--cacacgcgcgcacacacacacacacacaca 320

                                                                       
Query: 121 gaggcatgtctgcctggcaaaggaggggctgtgagagagcaaggggggaggggcgagaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gaggcatgtctgcctggcaaaggaggggctgtgagagagcaaggggggaggggtgagaag 380

                                                                       
Query: 181 gaagcagagaggagggctggcctttagttttagtttaatttgtttgtgactagaagctag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagcagagaggagggctggcctttagttttagtttaatttgtttgtgactagaagctag 440

                                                                       
Query: 241 ctgtgagaccttgaacagcttagcattctctcataaatttttagacacctattaaatgag 300
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtgagaccttgaacagcttagcatactctcataaatttttagacacctattaaatgag 500

                                                                       
Query: 301 actaatggtgaatgtttctgtctccttaatcatagaggtttgggaggatcaaatgagcct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actaatggtgaatgtttctgtctccttaatcatagaggtttgggaggatcaaatgagcct 560

                                                                       
Query: 361 taattcaatacattaaactcctactgtgtgtattagacttaacatatattaattatatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taattcaatacattaaactcctactgtgtgtattagacttaacatatattaattatatat 620

                                                                       
Query: 421 atatataattctctgttatatattatacattatatattatacatatattttcttatatat 480
           || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 at-t-taattctctgttatatattatacattatatattatacatatattttcttatatat 678

                                                                       
Query: 481 actaataatatacaaatatatacttattctcttatatattttattaaatataacaaataa 540
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 679 actaataatatacaaatatatacttactctcttatatattttattaaatataacaaataa 738

                                                                       
Query: 541 tatattatgtatattataatatatcatagtatatagttataatataaaatatcttata-- 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 739 tatattatgtatattataatatatcatagtatatagttataatataaaatatcttataat 798

                                                                     
Query: 599 ---taatattagcacaatatattagaatgtattataatatattatgtaataataaatt 653
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 atataatattagcacaatatattagaatgtattataatatattatgtaataataaatt 856


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)