Query= MSMg01no509_a12.b1 MSMg01no509_a12.b1 CHROMAT_FILE:
MSMg01no509_a12.b1 PHD_FILE: MSMg01no509_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:09 2005
(433 letters)
>mm_chr10_113679119_113679951
Length = 833
Score = 822 bits (425), Expect = 0.0
Identities = 431/433 (99%)
Strand = Plus / Plus
Query: 1 ggaagaaatcacagtcttcttaggaggagtaacgcctatgatttataatgaaacccagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaagaaatcacagtcttcttaggaggagtaacgcctatgatttataatgaaacccagtc 260
Query: 61 agccgtggaatcattgtcatatggttcttgaataaaatatgcaatagcataatgcaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccgtggaatcattgtcatatggttcttgaataaaatatgcaatagcataatgcaaaga 320
Query: 121 tgtgaaaggaagaacaactaatgattaagacagcacacactgctgacggtatcacaatta 180
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 321 tgtgaaaggaagaacaactaatgattaagacagcacacgctgctgaccgtatcacaatta 380
Query: 181 aaataatagtgagattctacgtttcactattatcaaaatttgaacaaaataacaggaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaataatagtgagattctacgtttcactattatcaaaatttgaacaaaataacaggaaat 440
Query: 241 atttgcaaatatccaacagatcatgtaaattcttatatttctggtgtggatatatttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttgcaaatatccaacagatcatgtaaattcttatatttctggtgtggatatatttttt 500
Query: 301 aactcttgtaaatgcaattactaaaacagtattaatacaaatataaatatgctttcctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactcttgtaaatgcaattactaaaacagtattaatacaaatataaatatgctttcctta 560
Query: 361 agttcacctttaagaatttattgtataggttgacctaagcatttatacaattttgaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agttcacctttaagaatttattgtataggttgacctaagcatttatacaattttgaaatg 620
Query: 421 ttcatggtaattt 433
|||||||||||||
Sbjct: 621 ttcatggtaattt 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_a12.g1 MSMg01no509_a12.g1 CHROMAT_FILE:
MSMg01no509_a12.g1 PHD_FILE: MSMg01no509_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:09 2005
(407 letters)
>mm_chr10_113835709_113836514
Length = 806
Score = 772 bits (399), Expect = 0.0
Identities = 405/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Minus
Query: 1 gtttatacctcatacaaaacttgttcaacagtctagtggtaccaacagcgttgagatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 gtttatacctcatacaaaacttgttcaacagtctagtggtaccaacagcgttgagatggc 547
Query: 61 agttttgcgctacacatttttcagttattgaaactttccgatgtttaaattatatcaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 agttttgcgctacacatttttcagttattgaaactttccgatgtttaaattatatcaggc 487
Query: 121 tttaaagtttctctttagttgtttaaataagtaatattttcaaaataataaaaaactaat 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 486 tttaaagtttctctttagttgtttaaataagtaatattttcaaaataat-aaaaactaat 428
Query: 181 gatatctcttggaatattctgtaaaatgtagctataaaattatattttctacttagagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gatatctcttggaatattctgtaaaatgtagctataaaattatattttctacttagagtt 368
Query: 241 tctacctttctctcttgtgtgttttacagatcaattatctacatgaaataataatgtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tctacctttctctcttgtgtgttttacagatcaattatctacatgaaataataatgtttt 308
Query: 301 gaaagtgtccacaaaagttcctttcttattgtatgtataacagcaaaactttgttttaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaaagtgtccacaaaagttcctttcttattgtatgtataacagcaaaactttgttttaat 248
Query: 361 tagaaaatactagattatttgccactttgggcattattatctctatg 407
||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 247 tagaaaatactagattatttgccactttgggcattatcatctctatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 806
Length adjustment: 9
Effective length of query: 398
Effective length of database: 797
Effective search space: 317206
Effective search space used: 317206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
