ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTTCTCATACCTATTTTAATCACCCTCAGTTTGATTAATTGAAGATCCA
AGTTTAATTCCAAAGTAAGAAATAACATTGTTTTTAAAACATACTAGAAA
AAATTGCTATAACTGAAAAATTATCTTGGGACTCACTATGAGTTCTGCGA
TACACGCAAGCTTCCTTTGAAATAATATAGAAAGAAATTCAGAGATAATT
ATTAGTATTCAGAGATAATTTTTCCATTAATTATCTATTTATACATTTGC
AGCAACATATTGAAACTATGTCACACTATGAATCTGTGGAAGTTTTAAAG
AAAAAAATACTCATGATTAATTTATATTCCTCTTCTTAAAGGAACAAATA
CAATTTGTCTCAGAACACCACACTGTTTTTAATGGGGTGTATTGATTACA
CTCTTCACTCCTTTCAGAGACATATGAATGCAGTAGCGAACTCTAGGGAA
AGACAGTGGAGAAAATGGAAATTCAGTAAGGCAGTGTTATTTTCTTCTAA
AAGTACCTGACTGTAGGAGATGAGTAACACGTCCAACTAACCCTGGGATT
TCAGCAGGAAGGTGAAATACTAGAGTTGAATCTATGTGTTCCAGTGTGTT
CCATAAACACGAAGACATACAAAAATTGCAAATAGGTAGGTGATGAATTA
TAAATAGTTAGAAGATACACAGTCATTATATACACATGAGACCCATATTT
AGCTATTCTCTGGTAAAATG

GCGGCAACCAGGNNTTCAAGGGAGGAAGAGGGTCCGCCGACCCCGTAGGG
GCGGGAGGGCGGAGTATAACGCATACAGGAAACCCCCCAAAAACCCGGTT
TCACCGCGGCCATTGCCTTAGGCACAAATGTCCCGGATAAAAGGGAAGAA
AACACGACACCAAAAGCCAACACCAACGAACGCAATGGAAGAAAAACTAA
TCGCGGACCAGCAATGGAACACTGACAATCACTACAATGCCAAAAACGAC
AAAACCAGATAGCACAC

Query= MSMg01no509_f19.b1 MSMg01no509_f19.b1 CHROMAT_FILE:
MSMg01no509_f19.b1 PHD_FILE: MSMg01no509_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:34 2005
         (703 letters)



>mm_chr10_46109440_46110544
          Length = 1105

 Score = 1307 bits (676), Expect = 0.0
 Identities = 698/706 (98%), Gaps = 4/706 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taatcaccctcagtttgattaattgaagatccaagtttaattccaaagtaagaaataa-c 59
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 905 taatcaccctcagtttgattaattgaagatccaagtttaattccaaagtaagaaa-aagc 847

                                                                       
Query: 60  attgtttttaaaacatactagaaaaaattgctataactgaaaaattatcttgggactcac 119
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 846 attgtttttaaaacatactagaaaaaattgttataactgaaaaattatcttgggactcac 787

                                                                       
Query: 120 tatgagttctgcgatacacgcaagcttcctttgaaataatatagaaagaaattcagagat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tatgagttctgcgatacacgcaagcttcctttgaaataatatagaaagaaattcagagat 727

                                                                       
Query: 180 aattattagtattcagagataatttttccattaattatctatttatacatttgcagcaac 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 aattattagtattcagagataatttttccattaattatctatttatacatttgcagcaac 667

                                                                       
Query: 240 atattgaaactatgtcacactatgaatctgtggaagttttaaagaaaaaaatactcatga 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 atattgaaactatgtcacactatgaatctgtggaagttttaaagaaaaaaatactcatga 607

                                                                       
Query: 300 ttaatttatattcctcttcttaaaggaacaaatacaatttgtctcagaacaccacactgt 359
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 606 ttaatttatattcctcttcttaaaggaacaaatacaattcgtctcagaacaccacactgt 547

                                                                       
Query: 360 --ttttaatggggtgtattgattacactcttcactcctttcagagacatatgaatgcagt 417
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gtttttaatggggtgtattgattacactcttcactcctttcagagacatatgaatgcagt 487

                                                                       
Query: 418 agcgaactctagggaaagacagtggagaaaatggaaattcagtaaggcagtgttattttc 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 agcgaactctagggaaagacagtggagaaaatggaaattcagtaaggcagtgttattttc 427

                                                                       
Query: 478 ttctaaaagtacctgactgtaggagatgagtaacacgtccaactaaccctgggatttcag 537
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcctaaaagtacctgactgtaggagatgagtaacacgtccaactaaccctgggatttcag 367

                                                                       
Query: 538 caggaaggtgaaatactagagttgaatctatgtgttccagtgtgttccataaacacgaag 597
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 366 caggaaggtgaaatactagagctgaatctatgtgttccagtgtgttccataaacacgaag 307

                                                                       
Query: 598 acatacaaaaattgcaaataggtaggtgatgaattataaatagttagaagatacacagtc 657
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 acatacaaaaattgcaaataggtaggtgatgaattataaatagttagaagatacacagtc 247

                                                         
Query: 658 attatatacacatgagacccatatttagctattctctggtaaaatg 703
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attatatacacatgagacccatatttagctattctctggtaaaatg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1105
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1095
Effective search space:   758835
Effective search space used:   758835
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)