Query= MSMg01no510_g05.b1 MSMg01no510_g05.b1 CHROMAT_FILE:
MSMg01no510_g05.b1 PHD_FILE: MSMg01no510_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:58 2005
(488 letters)
>mm_chr10_24623401_24624290
Length = 890
Score = 598 bits (309), Expect = e-175
Identities = 423/493 (85%), Gaps = 62/493 (12%)
Strand = Plus / Plus
Query: 1 gagtgactggcacaccaagcacatgagctaccacaaggtacccactctgagagagagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagtgactggcacaccaagcacatgagctaccacaaggtacccactctgagagagagcag 260
Query: 61 cagcggggatggttgttcagtcgattaggctgtttgcattgtgggcctgtggtttccttt 120
|||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||||
Sbjct: 261 cagcggggatggctgttcaattgattgggctgtttgcattgtgggcctgtggtttccttt 320
Query: 121 atggcctctgtacagacccacagcgagttagctgtaggctatgctaatgaataagagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggcctctgtacagacccacagcgagttagctgtaggctatgctaatgaataagagtaa 380
Query: 181 aatgtaactgtacttcgagtcggcatgtttctgaatcaaatgaagatagcagtaataaaa 240
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 aatgtaactgtacttcaagtcggcatgattctgaatcaaatgaagatagcagtaataaaa 440
Query: 241 tt--ttnat-gcttgacttttggggagctggggtgttgctgatttaagg-ggtcatgtgc 296
|| | || || |||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 441 ttagt--attgcatgacttttggggagctggggtgttgctgatttaaggagg-catgtgc 497
Query: 297 tttaaaaaatatttttt-gtagatttcttctctctctctctcccttccttccttccttcc 355
||||||||||||||||| ||||||||||||| | |||||||||||||||||||||||||
Sbjct: 498 tttaaaaaatatttttttgtagatttcttct-t-tctctctcccttccttccttccttc- 554
Query: 356 ttctttccttccttccttccttccttccttccttccttccttccttccttccttccttcc 415
|||||||||||||||||||
Sbjct: 555 ---tttccttccttccttcctt-------------------------------------- 573
Query: 416 ttcctttctttctttctttctttcttttttttttttttttgtaactcttttgtgctcgct 475
||||| ||| ||| ||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 574 ------tcttt-ttt-ttt-ttt-ttttttttttttttttgtagctcttttgtgctcgct 623
Query: 476 tttttggagctac 488
|||||||||||||
Sbjct: 624 tttttggagctac 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 890
Length adjustment: 10
Effective length of query: 478
Effective length of database: 880
Effective search space: 420640
Effective search space used: 420640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_g05.g1 MSMg01no510_g05.g1 CHROMAT_FILE:
MSMg01no510_g05.g1 PHD_FILE: MSMg01no510_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:58 2005
(326 letters)
>mm_chr10_24760893_24761619
Length = 727
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%), Gaps = 1/327 (0%)
Strand = Plus / Minus
Query: 1 gaccagcctggtccacataacaagtttcaggtcagccagggctacatagtaagactatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaccagcctggtccacataacaagtttcaggtcagccagggctacatagtaagactatgc 523
Query: 61 aaggactctcccagaatgctctccctccttactatggtggcatcccatttgttggtgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaggactctcccagaatgctctccctccttactatggtggcatcccatttgttggtgttg 463
Query: 121 gcagtaagctcctgcactattctttgttcttatctttgcaaaga-ttttttttcattgtt 179
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 462 gcagtaagctcctgcactattctttgttcttatctttgcaaagatttttttttcattgtt 403
Query: 180 ggcaataaatatttccgtttcctgaattcaacctgaccgcccatctgttctctgttggga 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 402 ggcaataaatatttccgtttcctgaattcaacctgaccgcccatctgttctctgctggga 343
Query: 240 ctccacatggcacagaaagccatgaagcatcatagaagagggagtgcaaggaatttataa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctccacatggcacagaaagccatgaagcatcatagaagagggagtgcaaggaatttataa 283
Query: 300 gccagaggaaggagtcgggcgttccag 326
|||||||||||||||||||||||||||
Sbjct: 282 gccagaggaaggagtcgggcgttccag 256
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 727
Length adjustment: 9
Effective length of query: 317
Effective length of database: 718
Effective search space: 227606
Effective search space used: 227606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
