Query= MSMg01no510_g09.b1 MSMg01no510_g09.b1 CHROMAT_FILE:
MSMg01no510_g09.b1 PHD_FILE: MSMg01no510_g09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:58 2005
(414 letters)
>mm_chr10_19400738_19401551
Length = 814
Score = 644 bits (333), Expect = 0.0
Identities = 394/421 (93%), Gaps = 14/421 (3%)
Strand = Plus / Plus
Query: 1 aataatttctgagactgtagagttatgatgaataggttttaactggcacattagaattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataatttctgagactgtagagttatgatgaataggttttaactggcacattagaattaa 260
Query: 61 aggttaaaacaaaaatcattttaaaaagatttctctatttttaattatgtgtgtgtgtgt 120
|||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 261 aggttaaaacaaaaatcatttttaaaagatttctctatttttaatta--tgtgtgtgtgt 318
Query: 121 ctgtctgtctgtctctgtatttctgtctctgtctctctgtctctgtctgactc------- 173
||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 319 ctgtctgtctgtctctgtatttctgtctctgactctctgtctctgtc--actctctgtgt 376
Query: 174 -tgtctctgtcactctctgtgtatgtgtgtgtgtgtatgtgtttctatgtgtgtgcatat 232
||| | ||| | | ||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 377 atgtgtgtgt--gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttctatgtgtgtgcatat 434
Query: 233 gcacacgcaatatctatgtgcttgtgtctaagagctcagaagaaggtgttgagtcctttg 292
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gcacacgcaatatctatgtgtttgtgtctaagagctcagaagaaggtgttgagtcctttg 494
Query: 293 gagctgcagtgacatgcagttgtgagctactctatatgagtgctgagaatcacacttgtc 352
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 495 gagctggagtgacatgcagttgtgagctactttatatgagtgctgagaatcacacttgtc 554
Query: 353 ctctggaagaacagcaagtacatatgacccctgggcaatctctcctgtctcataaaacca 412
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 555 ctctggaagaacagcaagtacatatgacccctgagcaatctctcctgtctcataaaacca 614
Query: 413 g 413
|
Sbjct: 615 g 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_g09.g1 MSMg01no510_g09.g1 CHROMAT_FILE:
MSMg01no510_g09.g1 PHD_FILE: MSMg01no510_g09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:58 2005
(319 letters)
>mm_chr10_19558842_19559563
Length = 722
Score = 596 bits (308), Expect = e-175
Identities = 318/322 (98%), Gaps = 3/322 (0%)
Strand = Plus / Minus
Query: 1 tggggctcaccatagttagattttagaccttccttgattcaattcatttaataaaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tggggctcaccatagttagattttagaccttccttgattcaattcatttaataaaaatgt 463
Query: 61 tcataaagaaactttttctgaaggcctaggatacccagtgttataaaaataatacagaat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 462 tcataaagaaactttttctgaaggcctaggatacccagtgttagaaaaataatacagaat 403
Query: 121 attgttaacaattcagacagggaaggtagaaataggtcagacagaaaacaatgggtgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 attgttaacaattcagacagggaaggtagaaataggtcagacagaaaacaatgggtgaag 343
Query: 181 ttgtcctggcctttcttttaatctttgagcaatatttgaagtagctcttggcagctgagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ttgtcctggcctttcttttaatctttgagcaatatttgaagtagctcttggcagctgagg 283
Query: 241 gttttttttttt--ctttt-caatatctgtgccagggtttctgttattcctttgggaagg 297
|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gtttttttttttttctttttcaatatctgtgccagggtttctgttattcctttgggaagg 223
Query: 298 tgatcaatataactaataaaaa 319
||||||||||||||||||||||
Sbjct: 222 tgatcaatataactaataaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 722
Length adjustment: 9
Effective length of query: 310
Effective length of database: 713
Effective search space: 221030
Effective search space used: 221030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
